Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Col18a1P39061 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Col18a1P39061 Gm14516-201ENSMUST00000120012 252 ntBASIC4.93□□□□□ -1.62
Col18a1P39061 Gm11471-201ENSMUST00000121824 198 ntBASIC4.93□□□□□ -1.62
Col18a1P39061 Gm26041-201ENSMUST00000158148 108 ntBASIC4.93□□□□□ -1.62
Col18a1P39061 Gm24499-201ENSMUST00000158446 104 ntBASIC4.93□□□□□ -1.62
Col18a1P39061 Gm28146-201ENSMUST00000185517 701 ntBASIC4.93□□□□□ -1.62
Col18a1P39061 Gm28574-201ENSMUST00000185757 699 ntBASIC4.93□□□□□ -1.62
Col18a1P39061 Gm28666-201ENSMUST00000186649 274 ntBASIC4.93□□□□□ -1.62
Col18a1P39061 Gm28397-201ENSMUST00000187970 699 ntBASIC4.93□□□□□ -1.62
Col18a1P39061 Gm29366-201ENSMUST00000190481 699 ntBASIC4.93□□□□□ -1.62
Col18a1P39061 Gm44811-201ENSMUST00000209120 228 ntBASIC4.93□□□□□ -1.62
Col18a1P39061 CT485612.4-201ENSMUST00000223405 250 ntBASIC4.93□□□□□ -1.62
Col18a1P39061 CT009604.2-201ENSMUST00000225531 377 ntBASIC4.93□□□□□ -1.62
Col18a1P39061 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.93□□□□□ -1.62
Col18a1P39061 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Col18a1P39061 Gm24144-201ENSMUST00000082632 111 ntBASIC4.93□□□□□ -1.62
Col18a1P39061 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
Col18a1P39061 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Col18a1P39061 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col18a1P39061 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col18a1P39061 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
Col18a1P39061 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.92□□□□□ -1.62
Col18a1P39061 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col18a1P39061 Gm22834-201ENSMUST00000102021 79 ntBASIC4.92□□□□□ -1.62
Col18a1P39061 Mir450-2-201ENSMUST00000102444 69 ntBASIC4.92□□□□□ -1.62
Col18a1P39061 Gm22956-201ENSMUST00000122520 80 ntBASIC4.92□□□□□ -1.62
Col18a1P39061 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Col18a1P39061 Gm27762-201ENSMUST00000183417 109 ntBASIC4.92□□□□□ -1.62
Col18a1P39061 CT030184.1-201ENSMUST00000222393 416 ntBASIC4.92□□□□□ -1.62
Col18a1P39061 AC161758.1-201ENSMUST00000226123 310 ntBASIC4.92□□□□□ -1.62
Col18a1P39061 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC4.92□□□□□ -1.62
Col18a1P39061 Gm25202-201ENSMUST00000082838 191 ntBASIC4.92□□□□□ -1.62
Col18a1P39061 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Col18a1P39061 Gm37298-201ENSMUST00000193770 3868 ntBASIC4.92□□□□□ -1.62
Col18a1P39061 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col18a1P39061 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col18a1P39061 Gm38706-201ENSMUST00000182397 2617 ntBASIC4.92□□□□□ -1.62
Col18a1P39061 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC4.92□□□□□ -1.62
Col18a1P39061 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Col18a1P39061 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col18a1P39061 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Col18a1P39061 Gm37056-201ENSMUST00000192141 1865 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Col18a1P39061 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC4.91□□□□□ -1.62
Col18a1P39061 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col18a1P39061 Gm9119-201ENSMUST00000118866 495 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 Gm14901-201ENSMUST00000119001 283 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 Ear-ps7-201ENSMUST00000161287 442 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 Gm25525-201ENSMUST00000177701 107 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 Gm26178-201ENSMUST00000177706 107 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 Gm26465-201ENSMUST00000178517 107 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 Gm24317-201ENSMUST00000178536 107 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 Gm25021-201ENSMUST00000179184 107 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 Gm22995-201ENSMUST00000179670 107 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 Gm24424-201ENSMUST00000179714 107 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 Gm24389-201ENSMUST00000179962 107 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 Gm25672-201ENSMUST00000180111 107 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 Gm29163-201ENSMUST00000188029 107 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 AC069561.3-201ENSMUST00000217321 114 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC4.91□□□□□ -1.62
Col18a1P39061 Gm23815-201ENSMUST00000083231 107 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 Gm23095-201ENSMUST00000083446 107 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 Gm25937-201ENSMUST00000083912 107 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 Gm23520-201ENSMUST00000093736 107 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC4.91□□□□□ -1.62
Col18a1P39061 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Col18a1P39061 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Col18a1P39061 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 Gm38248-201ENSMUST00000193744 5783 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col18a1P39061 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col18a1P39061 Gm23577-201ENSMUST00000103950 110 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 Gm12025-201ENSMUST00000117768 144 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 Gm11268-201ENSMUST00000118347 267 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 Gm8840-201ENSMUST00000122454 386 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC4.91□□□□□ -1.62
Col18a1P39061 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC4.91□□□□□ -1.62
Col18a1P39061 Gm27374-201ENSMUST00000183660 81 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 Gm18342-201ENSMUST00000186987 694 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 Gm44966-201ENSMUST00000208096 157 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 Gm45313-201ENSMUST00000210584 178 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 AC165157.3-201ENSMUST00000220815 103 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 AC166358.7-201ENSMUST00000221132 108 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 AC125543.5-201ENSMUST00000222799 108 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 CT485612.2-201ENSMUST00000223014 151 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 mt-Ti-201ENSMUST00000082393 69 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 Gm23615-201ENSMUST00000082602 65 ntBASIC4.91□□□□□ -1.62
Col18a1P39061 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Col18a1P39061 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.62
Col18a1P39061 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC4.9□□□□□ -1.62
Col18a1P39061 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
Col18a1P39061 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Col18a1P39061 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Col18a1P39061 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Col18a1P39061 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.9□□□□□ -1.62
Col18a1P39061 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 132.4 ms