Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm19177-201ENSMUST00000204520 613 ntBASIC4.96□□□□□ -1.61
Col18a1P39061 AC124433.2-201ENSMUST00000223867 291 ntBASIC4.96□□□□□ -1.61
Col18a1P39061 AC115289.1-201ENSMUST00000224915 522 ntBASIC4.96□□□□□ -1.61
Col18a1P39061 CT010506.2-201ENSMUST00000225618 183 ntBASIC4.96□□□□□ -1.61
Col18a1P39061 Gm23515-201ENSMUST00000082829 107 ntBASIC4.96□□□□□ -1.61
Col18a1P39061 Snord38a-201ENSMUST00000083746 71 ntBASIC4.96□□□□□ -1.61
Col18a1P39061 Gm5518-201ENSMUST00000084171 648 ntBASIC4.96□□□□□ -1.61
Col18a1P39061 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col18a1P39061 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Col18a1P39061 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Col18a1P39061 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col18a1P39061 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.96□□□□□ -1.62
Col18a1P39061 Gm42841-201ENSMUST00000199806 1932 ntBASIC4.96□□□□□ -1.62
Col18a1P39061 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
Col18a1P39061 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC4.96□□□□□ -1.62
Col18a1P39061 Trav20-201ENSMUST00000142754 347 ntBASIC4.96□□□□□ -1.62
Col18a1P39061 Gm4761-201ENSMUST00000178086 582 ntBASIC4.96□□□□□ -1.62
Col18a1P39061 Gm22448-201ENSMUST00000179254 107 ntBASIC4.96□□□□□ -1.62
Col18a1P39061 Gm27158-201ENSMUST00000183813 238 ntBASIC4.96□□□□□ -1.62
Col18a1P39061 Gm37817-201ENSMUST00000195276 434 ntBASIC4.96□□□□□ -1.62
Col18a1P39061 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC4.96□□□□□ -1.62
Col18a1P39061 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC4.96□□□□□ -1.62
Col18a1P39061 Gm19790-201ENSMUST00000214414 251 ntBASIC4.96□□□□□ -1.62
Col18a1P39061 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC4.96□□□□□ -1.62
Col18a1P39061 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC4.96□□□□□ -1.62
Col18a1P39061 Gm25815-201ENSMUST00000082755 107 ntBASIC4.96□□□□□ -1.62
Col18a1P39061 Gm25579-201ENSMUST00000083407 106 ntBASIC4.96□□□□□ -1.62
Col18a1P39061 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col18a1P39061 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Col18a1P39061 CT030170.3-201ENSMUST00000221205 1815 ntBASIC4.95□□□□□ -1.62
Col18a1P39061 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Col18a1P39061 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Col18a1P39061 Gm13873-201ENSMUST00000119208 427 ntBASIC4.95□□□□□ -1.62
Col18a1P39061 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC4.95□□□□□ -1.62
Col18a1P39061 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC4.95□□□□□ -1.62
Col18a1P39061 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC4.95□□□□□ -1.62
Col18a1P39061 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC4.95□□□□□ -1.62
Col18a1P39061 Gm24997-201ENSMUST00000157910 105 ntBASIC4.95□□□□□ -1.62
Col18a1P39061 Nron-204ENSMUST00000158971 370 ntBASIC4.95□□□□□ -1.62
Col18a1P39061 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Col18a1P39061 Mup-ps11-201ENSMUST00000178040 545 ntBASIC4.95□□□□□ -1.62
Col18a1P39061 Mup-ps3-201ENSMUST00000178315 545 ntBASIC4.95□□□□□ -1.62
Col18a1P39061 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Col18a1P39061 AC162931.1-201ENSMUST00000214184 267 ntBASIC4.95□□□□□ -1.62
Col18a1P39061 AC164567.2-201ENSMUST00000219363 445 ntBASIC4.95□□□□□ -1.62
Col18a1P39061 AC154552.4-201ENSMUST00000222171 151 ntBASIC4.95□□□□□ -1.62
Col18a1P39061 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.95□□□□□ -1.62
Col18a1P39061 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Col18a1P39061 Gm25134-201ENSMUST00000082646 160 ntBASIC4.95□□□□□ -1.62
Col18a1P39061 Gm4017-201ENSMUST00000084813 338 ntBASIC4.95□□□□□ -1.62
Col18a1P39061 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Col18a1P39061 Gm37250-201ENSMUST00000194919 2388 ntBASIC4.95□□□□□ -1.62
Col18a1P39061 AC155830.1-201ENSMUST00000220050 3836 ntBASIC4.95□□□□□ -1.62
Col18a1P39061 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Col18a1P39061 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Col18a1P39061 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col18a1P39061 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.94□□□□□ -1.62
Col18a1P39061 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
Col18a1P39061 Gm7853-201ENSMUST00000100708 478 ntBASIC4.94□□□□□ -1.62
Col18a1P39061 Gm16021-201ENSMUST00000121176 219 ntBASIC4.94□□□□□ -1.62
Col18a1P39061 Gm13356-201ENSMUST00000121678 335 ntBASIC4.94□□□□□ -1.62
Col18a1P39061 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC4.94□□□□□ -1.62
Col18a1P39061 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col18a1P39061 Gm24897-201ENSMUST00000179033 107 ntBASIC4.94□□□□□ -1.62
Col18a1P39061 Gm27783-201ENSMUST00000183534 105 ntBASIC4.94□□□□□ -1.62
Col18a1P39061 Gm28282-201ENSMUST00000186072 186 ntBASIC4.94□□□□□ -1.62
Col18a1P39061 AC160031.2-201ENSMUST00000218242 274 ntBASIC4.94□□□□□ -1.62
Col18a1P39061 Gm46993-201ENSMUST00000220708 259 ntBASIC4.94□□□□□ -1.62
Col18a1P39061 AC160931.2-201ENSMUST00000221445 351 ntBASIC4.94□□□□□ -1.62
Col18a1P39061 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col18a1P39061 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col18a1P39061 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Col18a1P39061 AC160931.3-201ENSMUST00000222111 2267 ntBASIC4.94□□□□□ -1.62
Col18a1P39061 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Col18a1P39061 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col18a1P39061 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Col18a1P39061 AC167250.1-201ENSMUST00000213739 3813 ntBASIC4.94□□□□□ -1.62
Col18a1P39061 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.94□□□□□ -1.62
Col18a1P39061 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col18a1P39061 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col18a1P39061 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC4.93□□□□□ -1.62
Col18a1P39061 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC4.93□□□□□ -1.62
Col18a1P39061 Gm25334-201ENSMUST00000158036 110 ntBASIC4.93□□□□□ -1.62
Col18a1P39061 Gm22584-201ENSMUST00000177935 92 ntBASIC4.93□□□□□ -1.62
Col18a1P39061 Gm25194-201ENSMUST00000177987 79 ntBASIC4.93□□□□□ -1.62
Col18a1P39061 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4.93□□□□□ -1.62
Col18a1P39061 Gm42623-201ENSMUST00000197225 379 ntBASIC4.93□□□□□ -1.62
Col18a1P39061 Gm44594-201ENSMUST00000208982 407 ntBASIC4.93□□□□□ -1.62
Col18a1P39061 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC4.93□□□□□ -1.62
Col18a1P39061 Gm16419-201ENSMUST00000221057 625 ntBASIC4.93□□□□□ -1.62
Col18a1P39061 Gm22265-201ENSMUST00000082947 116 ntBASIC4.93□□□□□ -1.62
Col18a1P39061 Gm22628-201ENSMUST00000082988 107 ntBASIC4.93□□□□□ -1.62
Col18a1P39061 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
Col18a1P39061 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC4.93□□□□□ -1.62
Col18a1P39061 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Col18a1P39061 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
Col18a1P39061 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
Col18a1P39061 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col18a1P39061 AC115047.2-201ENSMUST00000214421 1848 ntBASIC4.93□□□□□ -1.62
Col18a1P39061 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 181.9 ms