Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmgn5Q9JL35 Nespas-201ENSMUST00000143738 1083 ntBASIC19.4■□□□□ 0.7
Hmgn5Q9JL35 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Hmgn5Q9JL35 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Hmgn5Q9JL35 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Hmgn5Q9JL35 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmgn5Q9JL35 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Hmgn5Q9JL35 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hmgn5Q9JL35 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmgn5Q9JL35 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
Hmgn5Q9JL35 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
Hmgn5Q9JL35 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Hmgn5Q9JL35 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hmgn5Q9JL35 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hmgn5Q9JL35 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.39■□□□□ 0.69
Hmgn5Q9JL35 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hmgn5Q9JL35 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.39■□□□□ 0.69
Hmgn5Q9JL35 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hmgn5Q9JL35 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Hmgn5Q9JL35 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hmgn5Q9JL35 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Hmgn5Q9JL35 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hmgn5Q9JL35 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hmgn5Q9JL35 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hmgn5Q9JL35 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hmgn5Q9JL35 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hmgn5Q9JL35 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hmgn5Q9JL35 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC19.39■□□□□ 0.69
Hmgn5Q9JL35 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hmgn5Q9JL35 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.39■□□□□ 0.69
Hmgn5Q9JL35 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hmgn5Q9JL35 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hmgn5Q9JL35 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hmgn5Q9JL35 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hmgn5Q9JL35 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hmgn5Q9JL35 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hmgn5Q9JL35 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.38■□□□□ 0.69
Hmgn5Q9JL35 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hmgn5Q9JL35 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hmgn5Q9JL35 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hmgn5Q9JL35 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hmgn5Q9JL35 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.38■□□□□ 0.69
Hmgn5Q9JL35 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hmgn5Q9JL35 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hmgn5Q9JL35 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hmgn5Q9JL35 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Hmgn5Q9JL35 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.37■□□□□ 0.69
Hmgn5Q9JL35 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Hmgn5Q9JL35 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hmgn5Q9JL35 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Hmgn5Q9JL35 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hmgn5Q9JL35 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hmgn5Q9JL35 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hmgn5Q9JL35 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hmgn5Q9JL35 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hmgn5Q9JL35 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hmgn5Q9JL35 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Hmgn5Q9JL35 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Hmgn5Q9JL35 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hmgn5Q9JL35 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hmgn5Q9JL35 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hmgn5Q9JL35 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hmgn5Q9JL35 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Hmgn5Q9JL35 Gm38285-201ENSMUST00000192928 922 ntBASIC19.36■□□□□ 0.69
Hmgn5Q9JL35 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Hmgn5Q9JL35 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hmgn5Q9JL35 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hmgn5Q9JL35 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Hmgn5Q9JL35 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hmgn5Q9JL35 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hmgn5Q9JL35 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hmgn5Q9JL35 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hmgn5Q9JL35 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmgn5Q9JL35 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmgn5Q9JL35 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmgn5Q9JL35 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmgn5Q9JL35 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmgn5Q9JL35 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmgn5Q9JL35 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmgn5Q9JL35 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmgn5Q9JL35 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hmgn5Q9JL35 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmgn5Q9JL35 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Hmgn5Q9JL35 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.35■□□□□ 0.69
Hmgn5Q9JL35 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmgn5Q9JL35 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmgn5Q9JL35 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Hmgn5Q9JL35 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmgn5Q9JL35 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmgn5Q9JL35 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Hmgn5Q9JL35 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmgn5Q9JL35 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hmgn5Q9JL35 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmgn5Q9JL35 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmgn5Q9JL35 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hmgn5Q9JL35 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.35■□□□□ 0.69
Hmgn5Q9JL35 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.35■□□□□ 0.69
Hmgn5Q9JL35 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmgn5Q9JL35 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmgn5Q9JL35 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms