Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Thumpd3P97770 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Thumpd3P97770 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Thumpd3P97770 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Thumpd3P97770 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Thumpd3P97770 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Thumpd3P97770 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Thumpd3P97770 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Thumpd3P97770 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Thumpd3P97770 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.52■□□□□ 0.4
Thumpd3P97770 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Thumpd3P97770 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.52■□□□□ 0.4
Thumpd3P97770 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.52■□□□□ 0.4
Thumpd3P97770 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Thumpd3P97770 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Thumpd3P97770 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.52■□□□□ 0.39
Thumpd3P97770 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.52■□□□□ 0.39
Thumpd3P97770 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Thumpd3P97770 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Thumpd3P97770 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Thumpd3P97770 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Thumpd3P97770 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Thumpd3P97770 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thumpd3P97770 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thumpd3P97770 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thumpd3P97770 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thumpd3P97770 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thumpd3P97770 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thumpd3P97770 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thumpd3P97770 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thumpd3P97770 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thumpd3P97770 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
Thumpd3P97770 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thumpd3P97770 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thumpd3P97770 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.51■□□□□ 0.39
Thumpd3P97770 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thumpd3P97770 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thumpd3P97770 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.51■□□□□ 0.39
Thumpd3P97770 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thumpd3P97770 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thumpd3P97770 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Thumpd3P97770 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thumpd3P97770 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Thumpd3P97770 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Thumpd3P97770 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Thumpd3P97770 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Thumpd3P97770 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Thumpd3P97770 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.5■□□□□ 0.39
Thumpd3P97770 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Thumpd3P97770 Gm44549-201ENSMUST00000208351 577 ntBASIC17.5■□□□□ 0.39
Thumpd3P97770 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Thumpd3P97770 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Thumpd3P97770 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Thumpd3P97770 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Thumpd3P97770 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Thumpd3P97770 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Thumpd3P97770 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Thumpd3P97770 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Thumpd3P97770 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Thumpd3P97770 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Thumpd3P97770 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.49■□□□□ 0.39
Thumpd3P97770 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Thumpd3P97770 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Thumpd3P97770 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Thumpd3P97770 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Thumpd3P97770 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Thumpd3P97770 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Thumpd3P97770 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Thumpd3P97770 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.48■□□□□ 0.39
Thumpd3P97770 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Thumpd3P97770 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Thumpd3P97770 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Thumpd3P97770 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Thumpd3P97770 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Thumpd3P97770 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Thumpd3P97770 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Thumpd3P97770 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Thumpd3P97770 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Thumpd3P97770 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Thumpd3P97770 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Thumpd3P97770 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Thumpd3P97770 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Thumpd3P97770 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Thumpd3P97770 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Thumpd3P97770 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Thumpd3P97770 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Thumpd3P97770 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Thumpd3P97770 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Thumpd3P97770 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Thumpd3P97770 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Thumpd3P97770 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Thumpd3P97770 Dio3-201ENSMUST00000097228 1449 ntBASIC17.47■□□□□ 0.39
Thumpd3P97770 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Thumpd3P97770 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Thumpd3P97770 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Thumpd3P97770 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Thumpd3P97770 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Thumpd3P97770 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Thumpd3P97770 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.47■□□□□ 0.39
Thumpd3P97770 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms