Protein–RNA interactions for Protein: P39968

VAC8, Vacuolar protein 8, yeastyeast

Predictions only

Length 578 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VAC8P39968 YOR192C-BYOR192C-B 5313 nt0.82□□□□□ -2.28
VAC8P39968 PMP2YEL017C-A 132 nt0.81□□□□□ -2.28
VAC8P39968 YJL077W-AYJL077W-A 87 nt0.81□□□□□ -2.28
VAC8P39968 SEC10YLR166C 2616 nt0.79□□□□□ -2.28
VAC8P39968 YMR160WYMR160W 2451 nt0.76□□□□□ -2.29
VAC8P39968 snR69snR69 101 nt0.73□□□□□ -2.29
VAC8P39968 tF(GAA)BtF(GAA)B 73 nt0.73□□□□□ -2.29
VAC8P39968 tF(GAA)FtF(GAA)F 73 nt0.73□□□□□ -2.29
VAC8P39968 tF(GAA)GtF(GAA)G 73 nt0.73□□□□□ -2.29
VAC8P39968 tF(GAA)H1tF(GAA)H1 73 nt0.73□□□□□ -2.29
VAC8P39968 tF(GAA)H2tF(GAA)H2 73 nt0.73□□□□□ -2.29
VAC8P39968 tF(GAA)MtF(GAA)M 73 nt0.73□□□□□ -2.29
VAC8P39968 tF(GAA)P1tF(GAA)P1 73 nt0.73□□□□□ -2.29
VAC8P39968 tF(GAA)P2tF(GAA)P2 73 nt0.73□□□□□ -2.29
VAC8P39968 YBL100W-BYBL100W-B 5313 nt0.72□□□□□ -2.29
VAC8P39968 SBH1YER087C-B 249 nt0.72□□□□□ -2.29
VAC8P39968 tT(AGU)BtT(AGU)B 73 nt0.72□□□□□ -2.29
VAC8P39968 tT(AGU)CtT(AGU)C 73 nt0.72□□□□□ -2.29
VAC8P39968 tT(AGU)DtT(AGU)D 73 nt0.72□□□□□ -2.29
VAC8P39968 tT(AGU)HtT(AGU)H 73 nt0.72□□□□□ -2.29
VAC8P39968 tT(AGU)I1tT(AGU)I1 73 nt0.72□□□□□ -2.29
VAC8P39968 tT(AGU)I2tT(AGU)I2 73 nt0.72□□□□□ -2.29
VAC8P39968 tT(AGU)JtT(AGU)J 73 nt0.72□□□□□ -2.29
VAC8P39968 tT(AGU)N1tT(AGU)N1 73 nt0.72□□□□□ -2.29
VAC8P39968 tT(AGU)N2tT(AGU)N2 73 nt0.72□□□□□ -2.29
VAC8P39968 tT(AGU)O1tT(AGU)O1 73 nt0.72□□□□□ -2.29
VAC8P39968 tT(AGU)O2tT(AGU)O2 73 nt0.72□□□□□ -2.29
VAC8P39968 YBR178WYBR178W 375 nt0.72□□□□□ -2.29
VAC8P39968 MYO1YHR023W 5787 nt0.72□□□□□ -2.29
VAC8P39968 snR61snR61 90 nt0.71□□□□□ -2.3
VAC8P39968 YBR196C-AYBR196C-A 150 nt0.71□□□□□ -2.3
VAC8P39968 ORC3YLL004W 1851 nt0.71□□□□□ -2.3
VAC8P39968 EST1YLR233C 2100 nt0.69□□□□□ -2.3
VAC8P39968 YOR186C-AYOR186C-A 210 nt0.69□□□□□ -2.3
VAC8P39968 tD(GUC)QtD(GUC)Q 75 nt0.67□□□□□ -2.3
VAC8P39968 RDS3YPR094W 324 nt0.66□□□□□ -2.3
VAC8P39968 YNL103W-AYNL103W-A 90 nt0.64□□□□□ -2.31
VAC8P39968 YMR272W-AYMR272W-A 114 nt0.62□□□□□ -2.31
VAC8P39968 FMP27YLR454W 7887 nt0.59□□□□□ -2.31
VAC8P39968 UTP10YJL109C 5310 nt0.57□□□□□ -2.32
VAC8P39968 YKL145W-AYKL145W-A 93 nt0.57□□□□□ -2.32
VAC8P39968 TFB5YDR079C-A 219 nt0.56□□□□□ -2.32
VAC8P39968 YAL037C-AYAL037C-A 93 nt0.56□□□□□ -2.32
VAC8P39968 YLR286W-AYLR286W-A 135 nt0.54□□□□□ -2.32
VAC8P39968 YOL014WYOL014W 375 nt0.54□□□□□ -2.32
VAC8P39968 tQ(UUG)QtQ(UUG)Q 76 nt0.52□□□□□ -2.33
VAC8P39968 YMR326CYMR326C 309 nt0.52□□□□□ -2.33
VAC8P39968 YDL159C-BYDL159C-B 177 nt0.51□□□□□ -2.33
VAC8P39968 YGL041C-BYGL041C-B 183 nt0.5□□□□□ -2.33
VAC8P39968 AI1Q0050 2505 nt0.47□□□□□ -2.33
VAC8P39968 snR81snR81 201 nt0.46□□□□□ -2.34
VAC8P39968 YLR299C-AYLR299C-A 93 nt0.46□□□□□ -2.34
VAC8P39968 YER090C-AYER090C-A 90 nt0.44□□□□□ -2.34
VAC8P39968 YHR217CYHR217C 462 nt0.42□□□□□ -2.34
VAC8P39968 ESP1YGR098C 4893 nt0.42□□□□□ -2.34
VAC8P39968 YOL013W-AYOL013W-A 192 nt0.4□□□□□ -2.35
VAC8P39968 YOL083C-AYOL083C-A 141 nt0.39□□□□□ -2.35
VAC8P39968 YBL071C-BYBL071C-B 99 nt0.37□□□□□ -2.35
VAC8P39968 SOV1YMR066W 2697 nt0.36□□□□□ -2.35
VAC8P39968 YDR524C-AYDR524C-A 120 nt0.36□□□□□ -2.35
VAC8P39968 YBL109WYBL109W 336 nt0.35□□□□□ -2.35
VAC8P39968 YBL100W-CYBL100W-C 120 nt0.3□□□□□ -2.36
VAC8P39968 snR50snR50 90 nt0.28□□□□□ -2.36
VAC8P39968 THO2YNL139C 4794 nt0.28□□□□□ -2.36
VAC8P39968 YOL164W-AYOL164W-A 183 nt0.27□□□□□ -2.37
VAC8P39968 YER078W-AYER078W-A 165 nt0.23□□□□□ -2.37
VAC8P39968 tS(GCU)Q1tS(GCU)Q1 86 nt0.21□□□□□ -2.38
VAC8P39968 snR67snR67 82 nt0.2□□□□□ -2.38
VAC8P39968 YML100W-AYML100W-A 174 nt0.2□□□□□ -2.38
VAC8P39968 YHR180C-BYHR180C-B 105 nt0.19□□□□□ -2.38
VAC8P39968 snR128snR128 126 nt0.19□□□□□ -2.38
VAC8P39968 YGR240C-AYGR240C-A 201 nt0.17□□□□□ -2.38
VAC8P39968 YML054C-AYML054C-A 159 nt0.17□□□□□ -2.38
VAC8P39968 snR62snR62 100 nt0.16□□□□□ -2.38
VAC8P39968 YDL247W-AYDL247W-A 75 nt0.09□□□□□ -2.4
VAC8P39968 snR47snR47 99 nt0.06□□□□□ -2.4
VAC8P39968 YBR296C-AYBR296C-A 120 nt0.01□□□□□ -2.41
VAC8P39968 RPL41AYDL184C 78 nt0□□□□□ -2.41
VAC8P39968 YBR109W-AYBR109W-A 225 nt-0.01□□□□□ -2.41
VAC8P39968 snR45snR45 172 nt-0.01□□□□□ -2.41
VAC8P39968 YDR034C-AYDR034C-A 177 nt-0.04□□□□□ -2.42
VAC8P39968 PAU9YBL108C-A 129 nt-0.04□□□□□ -2.42
VAC8P39968 YLL066W-BYLL066W-B 171 nt-0.13□□□□□ -2.43
VAC8P39968 SKI7YOR076C 2244 nt-0.14□□□□□ -2.43
VAC8P39968 SBH2YER019C-A 267 nt-0.14□□□□□ -2.43
VAC8P39968 YJL113WYJL113W 4647 nt-0.17□□□□□ -2.44
VAC8P39968 snR38snR38 95 nt-0.18□□□□□ -2.44
VAC8P39968 tA(UGC)QtA(UGC)Q 76 nt-0.22□□□□□ -2.44
VAC8P39968 YKL225WYKL225W 348 nt-0.22□□□□□ -2.44
VAC8P39968 YHL009W-BYHL009W-B 5409 nt-0.31□□□□□ -2.46
VAC8P39968 YKL106C-AYKL106C-A 120 nt-0.33□□□□□ -2.46
VAC8P39968 snR64snR64 101 nt-0.37□□□□□ -2.47
VAC8P39968 snR161snR161 161 nt-0.45□□□□□ -2.48
VAC8P39968 YOR376W-AYOR376W-A 156 nt-0.47□□□□□ -2.48
VAC8P39968 URB1YKL014C 5295 nt-0.5□□□□□ -2.49
VAC8P39968 YOR316C-AYOR316C-A 210 nt-0.55□□□□□ -2.5
VAC8P39968 snR53snR53 91 nt-0.55□□□□□ -2.5
VAC8P39968 YGR122C-AYGR122C-A 129 nt-0.62□□□□□ -2.51
VAC8P39968 YDL159W-AYDL159W-A 132 nt-0.64□□□□□ -2.51
VAC8P39968 snR33snR33 183 nt-0.67□□□□□ -2.52
Retrieved 100 of 7,029 protein–RNA pairs in 8.3 ms