Protein–RNA interactions for Protein: P38877

CTF8, Chromosome transmission fidelity protein 8, yeastyeast

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTF8P38877 RPS26AYGL189C 360 nt0.97□□□□□ -2.25
CTF8P38877 tV(UAC)BtV(UAC)B 74 nt0.97□□□□□ -2.25
CTF8P38877 tV(UAC)DtV(UAC)D 74 nt0.97□□□□□ -2.25
CTF8P38877 YPR117WYPR117W 7470 nt0.95□□□□□ -2.26
CTF8P38877 snR62snR62 100 nt0.95□□□□□ -2.26
CTF8P38877 VAM6YDL077C 3150 nt0.95□□□□□ -2.26
CTF8P38877 YOL164W-AYOL164W-A 183 nt0.94□□□□□ -2.26
CTF8P38877 IML1YJR138W 4755 nt0.93□□□□□ -2.26
CTF8P38877 YBL100W-CYBL100W-C 120 nt0.93□□□□□ -2.26
CTF8P38877 RDS3YPR094W 324 nt0.91□□□□□ -2.26
CTF8P38877 BUL2YML111W 2763 nt0.91□□□□□ -2.26
CTF8P38877 BEM2YER155C 6504 nt0.9□□□□□ -2.26
CTF8P38877 YLR299C-AYLR299C-A 93 nt0.9□□□□□ -2.27
CTF8P38877 YDL159C-BYDL159C-B 177 nt0.89□□□□□ -2.27
CTF8P38877 YJL077W-AYJL077W-A 87 nt0.89□□□□□ -2.27
CTF8P38877 NST1YNL091W 3723 nt0.89□□□□□ -2.27
CTF8P38877 PET111YMR257C 2403 nt0.88□□□□□ -2.27
CTF8P38877 PAU12YGR294W 363 nt0.87□□□□□ -2.27
CTF8P38877 YDR371C-AYDR371C-A 105 nt0.86□□□□□ -2.27
CTF8P38877 YGR240C-AYGR240C-A 201 nt0.86□□□□□ -2.27
CTF8P38877 YDR034C-AYDR034C-A 177 nt0.85□□□□□ -2.27
CTF8P38877 EMT1tM(CAU)D 73 nt0.85□□□□□ -2.27
CTF8P38877 EMT5tM(CAU)J1 73 nt0.85□□□□□ -2.27
CTF8P38877 EMT3tM(CAU)J2 73 nt0.85□□□□□ -2.27
CTF8P38877 EMT4tM(CAU)M 73 nt0.85□□□□□ -2.27
CTF8P38877 EMT2tM(CAU)O2 73 nt0.85□□□□□ -2.27
CTF8P38877 tQ(UUG)QtQ(UUG)Q 76 nt0.85□□□□□ -2.27
CTF8P38877 snR47snR47 99 nt0.83□□□□□ -2.28
CTF8P38877 PAU24YBR301W 363 nt0.83□□□□□ -2.28
CTF8P38877 YPL060C-AYPL060C-A 3315 nt0.82□□□□□ -2.28
CTF8P38877 ORC3YLL004W 1851 nt0.79□□□□□ -2.28
CTF8P38877 LTE1YAL024C 4308 nt0.76□□□□□ -2.29
CTF8P38877 DOP1YDR141C 5097 nt0.74□□□□□ -2.29
CTF8P38877 YHR180C-BYHR180C-B 105 nt0.72□□□□□ -2.29
CTF8P38877 YML054C-AYML054C-A 159 nt0.72□□□□□ -2.29
CTF8P38877 YNL054W-BYNL054W-B 5250 nt0.71□□□□□ -2.3
CTF8P38877 snR50snR50 90 nt0.69□□□□□ -2.3
CTF8P38877 YER090C-AYER090C-A 90 nt0.68□□□□□ -2.3
CTF8P38877 YPR159C-AYPR159C-A 102 nt0.66□□□□□ -2.3
CTF8P38877 YBL100W-BYBL100W-B 5313 nt0.66□□□□□ -2.3
CTF8P38877 MLP1YKR095W 5628 nt0.66□□□□□ -2.3
CTF8P38877 UTP10YJL109C 5310 nt0.65□□□□□ -2.31
CTF8P38877 AI1Q0050 2505 nt0.64□□□□□ -2.31
CTF8P38877 RPL41AYDL184C 78 nt0.61□□□□□ -2.31
CTF8P38877 YBR109W-AYBR109W-A 225 nt0.61□□□□□ -2.31
CTF8P38877 tT(AGU)BtT(AGU)B 73 nt0.6□□□□□ -2.31
CTF8P38877 tT(AGU)CtT(AGU)C 73 nt0.6□□□□□ -2.31
CTF8P38877 tT(AGU)DtT(AGU)D 73 nt0.6□□□□□ -2.31
CTF8P38877 tT(AGU)HtT(AGU)H 73 nt0.6□□□□□ -2.31
CTF8P38877 tT(AGU)I1tT(AGU)I1 73 nt0.6□□□□□ -2.31
CTF8P38877 tT(AGU)I2tT(AGU)I2 73 nt0.6□□□□□ -2.31
CTF8P38877 tT(AGU)JtT(AGU)J 73 nt0.6□□□□□ -2.31
CTF8P38877 tT(AGU)N1tT(AGU)N1 73 nt0.6□□□□□ -2.31
CTF8P38877 tT(AGU)N2tT(AGU)N2 73 nt0.6□□□□□ -2.31
CTF8P38877 tT(AGU)O1tT(AGU)O1 73 nt0.6□□□□□ -2.31
CTF8P38877 tT(AGU)O2tT(AGU)O2 73 nt0.6□□□□□ -2.31
CTF8P38877 YMR272W-AYMR272W-A 114 nt0.58□□□□□ -2.32
CTF8P38877 YBR296C-AYBR296C-A 120 nt0.57□□□□□ -2.32
CTF8P38877 YKL225WYKL225W 348 nt0.56□□□□□ -2.32
CTF8P38877 YOR186C-AYOR186C-A 210 nt0.56□□□□□ -2.32
CTF8P38877 YMR160WYMR160W 2451 nt0.55□□□□□ -2.32
CTF8P38877 snR64snR64 101 nt0.52□□□□□ -2.33
CTF8P38877 snR67snR67 82 nt0.52□□□□□ -2.33
CTF8P38877 snR38snR38 95 nt0.49□□□□□ -2.33
CTF8P38877 IQG1YPL242C 4488 nt0.46□□□□□ -2.34
CTF8P38877 snR53snR53 91 nt0.43□□□□□ -2.34
CTF8P38877 UTP20YBL004W 7482 nt0.38□□□□□ -2.35
CTF8P38877 MLP2YIL149C 5040 nt0.38□□□□□ -2.35
CTF8P38877 SOV1YMR066W 2697 nt0.36□□□□□ -2.35
CTF8P38877 tF(GAA)BtF(GAA)B 73 nt0.35□□□□□ -2.35
CTF8P38877 tF(GAA)FtF(GAA)F 73 nt0.35□□□□□ -2.35
CTF8P38877 tF(GAA)GtF(GAA)G 73 nt0.35□□□□□ -2.35
CTF8P38877 tF(GAA)H1tF(GAA)H1 73 nt0.35□□□□□ -2.35
CTF8P38877 tF(GAA)H2tF(GAA)H2 73 nt0.35□□□□□ -2.35
CTF8P38877 tF(GAA)MtF(GAA)M 73 nt0.35□□□□□ -2.35
CTF8P38877 tF(GAA)P1tF(GAA)P1 73 nt0.35□□□□□ -2.35
CTF8P38877 tF(GAA)P2tF(GAA)P2 73 nt0.35□□□□□ -2.35
CTF8P38877 YKL145W-AYKL145W-A 93 nt0.35□□□□□ -2.35
CTF8P38877 YML100W-AYML100W-A 174 nt0.33□□□□□ -2.36
CTF8P38877 SKI7YOR076C 2244 nt0.32□□□□□ -2.36
CTF8P38877 THO2YNL139C 4794 nt0.31□□□□□ -2.36
CTF8P38877 YOL013W-AYOL013W-A 192 nt0.3□□□□□ -2.36
CTF8P38877 snR128snR128 126 nt0.29□□□□□ -2.36
CTF8P38877 FMP27YLR454W 7887 nt0.28□□□□□ -2.36
CTF8P38877 YDL159W-AYDL159W-A 132 nt0.28□□□□□ -2.36
CTF8P38877 ESP1YGR098C 4893 nt0.23□□□□□ -2.37
CTF8P38877 YOL014WYOL014W 375 nt0.22□□□□□ -2.37
CTF8P38877 YGR122C-AYGR122C-A 129 nt0.19□□□□□ -2.38
CTF8P38877 YKL106C-AYKL106C-A 120 nt0.18□□□□□ -2.38
CTF8P38877 PAU9YBL108C-A 129 nt0.17□□□□□ -2.38
CTF8P38877 YER078W-AYER078W-A 165 nt0.06□□□□□ -2.4
CTF8P38877 YLR149C-AYLR149C-A 87 nt0.05□□□□□ -2.4
CTF8P38877 YOR376W-AYOR376W-A 156 nt0.02□□□□□ -2.41
CTF8P38877 tA(UGC)QtA(UGC)Q 76 nt-0.04□□□□□ -2.42
CTF8P38877 YDL114W-AYDL114W-A 114 nt-0.06□□□□□ -2.42
CTF8P38877 SBH2YER019C-A 267 nt-0.08□□□□□ -2.42
CTF8P38877 YOR316C-AYOR316C-A 210 nt-0.09□□□□□ -2.42
CTF8P38877 YKL096C-BYKL096C-B 150 nt-0.14□□□□□ -2.43
CTF8P38877 tV(UAC)QtV(UAC)Q 76 nt-0.17□□□□□ -2.44
CTF8P38877 snR161snR161 161 nt-0.2□□□□□ -2.44
Retrieved 100 of 7,029 protein–RNA pairs in 12.1 ms