Protein–RNA interactions for Protein: P36100

TFA1, Transcription initiation factor IIE subunit alpha, yeastyeast

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TFA1P36100 YJL077W-AYJL077W-A 87 nt2.24□□□□□ -2.05
TFA1P36100 BUL2YML111W 2763 nt2.24□□□□□ -2.05
TFA1P36100 PAU12YGR294W 363 nt2.23□□□□□ -2.05
TFA1P36100 CAT8YMR280C 4302 nt2.23□□□□□ -2.05
TFA1P36100 SIP4YJL089W 2490 nt2.22□□□□□ -2.05
TFA1P36100 RPL41AYDL184C 78 nt2.21□□□□□ -2.06
TFA1P36100 YBR296C-AYBR296C-A 120 nt2.18□□□□□ -2.06
TFA1P36100 AI1Q0050 2505 nt2.17□□□□□ -2.06
TFA1P36100 NUP192YJL039C 5052 nt2.14□□□□□ -2.07
TFA1P36100 LTE1YAL024C 4308 nt2.11□□□□□ -2.07
TFA1P36100 YNL284C-BYNL284C-B 5268 nt2.11□□□□□ -2.07
TFA1P36100 YNL054W-BYNL054W-B 5250 nt2.1□□□□□ -2.07
TFA1P36100 YLR149C-AYLR149C-A 87 nt2.1□□□□□ -2.07
TFA1P36100 SCC2YDR180W 4482 nt2.1□□□□□ -2.07
TFA1P36100 HKR1YDR420W 5409 nt2.07□□□□□ -2.08
TFA1P36100 YDL159W-AYDL159W-A 132 nt2.07□□□□□ -2.08
TFA1P36100 tQ(UUG)QtQ(UUG)Q 76 nt2.05□□□□□ -2.08
TFA1P36100 FIG2YCR089W 4830 nt2.04□□□□□ -2.08
TFA1P36100 CCH1YGR217W 6120 nt2.03□□□□□ -2.08
TFA1P36100 RKR1YMR247C 4689 nt2.03□□□□□ -2.09
TFA1P36100 YPR117WYPR117W 7470 nt1.99□□□□□ -2.09
TFA1P36100 SKI7YOR076C 2244 nt1.97□□□□□ -2.09
TFA1P36100 BUD3YCL014W 4911 nt1.95□□□□□ -2.1
TFA1P36100 YER090C-AYER090C-A 90 nt1.95□□□□□ -2.1
TFA1P36100 YKL096C-BYKL096C-B 150 nt1.95□□□□□ -2.1
TFA1P36100 MYO1YHR023W 5787 nt1.94□□□□□ -2.1
TFA1P36100 YOR192C-BYOR192C-B 5313 nt1.92□□□□□ -2.1
TFA1P36100 tQ(UUG)E2tQ(UUG)E2 72 nt1.89□□□□□ -2.11
TFA1P36100 PET111YMR257C 2403 nt1.84□□□□□ -2.11
TFA1P36100 YGR122C-AYGR122C-A 129 nt1.84□□□□□ -2.11
TFA1P36100 VAM6YDL077C 3150 nt1.79□□□□□ -2.12
TFA1P36100 MLP1YKR095W 5628 nt1.73□□□□□ -2.13
TFA1P36100 MLP2YIL149C 5040 nt1.7□□□□□ -2.14
TFA1P36100 tH(GUG)E1tH(GUG)E1 72 nt1.68□□□□□ -2.14
TFA1P36100 tH(GUG)E2tH(GUG)E2 72 nt1.68□□□□□ -2.14
TFA1P36100 tH(GUG)G1tH(GUG)G1 72 nt1.68□□□□□ -2.14
TFA1P36100 tH(GUG)G2tH(GUG)G2 72 nt1.68□□□□□ -2.14
TFA1P36100 tH(GUG)HtH(GUG)H 72 nt1.68□□□□□ -2.14
TFA1P36100 tH(GUG)KtH(GUG)K 72 nt1.68□□□□□ -2.14
TFA1P36100 tH(GUG)MtH(GUG)M 72 nt1.68□□□□□ -2.14
TFA1P36100 YER078W-AYER078W-A 165 nt1.68□□□□□ -2.14
TFA1P36100 DOP1YDR141C 5097 nt1.67□□□□□ -2.14
TFA1P36100 PAU24YBR301W 363 nt1.66□□□□□ -2.14
TFA1P36100 BEM2YER155C 6504 nt1.65□□□□□ -2.14
TFA1P36100 snR75snR75 89 nt1.64□□□□□ -2.15
TFA1P36100 snR67snR67 82 nt1.63□□□□□ -2.15
TFA1P36100 YBL100W-BYBL100W-B 5313 nt1.6□□□□□ -2.15
TFA1P36100 YJR029WYJR029W 5268 nt1.57□□□□□ -2.16
TFA1P36100 IQG1YPL242C 4488 nt1.55□□□□□ -2.16
TFA1P36100 YMR160WYMR160W 2451 nt1.54□□□□□ -2.16
TFA1P36100 EMT1tM(CAU)D 73 nt1.51□□□□□ -2.17
TFA1P36100 EMT5tM(CAU)J1 73 nt1.51□□□□□ -2.17
TFA1P36100 EMT3tM(CAU)J2 73 nt1.51□□□□□ -2.17
TFA1P36100 EMT4tM(CAU)M 73 nt1.51□□□□□ -2.17
TFA1P36100 EMT2tM(CAU)O2 73 nt1.51□□□□□ -2.17
TFA1P36100 YPR137C-BYPR137C-B 5268 nt1.45□□□□□ -2.18
TFA1P36100 tV(UAC)BtV(UAC)B 74 nt1.42□□□□□ -2.18
TFA1P36100 tV(UAC)DtV(UAC)D 74 nt1.42□□□□□ -2.18
TFA1P36100 IML1YJR138W 4755 nt1.41□□□□□ -2.18
TFA1P36100 YOR186C-AYOR186C-A 210 nt1.36□□□□□ -2.19
TFA1P36100 YPR159C-AYPR159C-A 102 nt1.32□□□□□ -2.2
TFA1P36100 YKL106C-AYKL106C-A 120 nt1.26□□□□□ -2.21
TFA1P36100 UTP20YBL004W 7482 nt1.18□□□□□ -2.22
TFA1P36100 YDL114W-AYDL114W-A 114 nt1.17□□□□□ -2.22
TFA1P36100 YML100W-AYML100W-A 174 nt1.16□□□□□ -2.22
TFA1P36100 tV(UAC)QtV(UAC)Q 76 nt1.13□□□□□ -2.23
TFA1P36100 UTP10YJL109C 5310 nt1.02□□□□□ -2.25
TFA1P36100 SOV1YMR066W 2697 nt1.01□□□□□ -2.25
TFA1P36100 YOR376W-AYOR376W-A 156 nt0.96□□□□□ -2.26
TFA1P36100 YMR272W-AYMR272W-A 114 nt0.87□□□□□ -2.27
TFA1P36100 ESP1YGR098C 4893 nt0.87□□□□□ -2.27
TFA1P36100 tT(AGU)BtT(AGU)B 73 nt0.84□□□□□ -2.27
TFA1P36100 tT(AGU)CtT(AGU)C 73 nt0.84□□□□□ -2.27
TFA1P36100 tT(AGU)DtT(AGU)D 73 nt0.84□□□□□ -2.27
TFA1P36100 tT(AGU)HtT(AGU)H 73 nt0.84□□□□□ -2.27
TFA1P36100 tT(AGU)I1tT(AGU)I1 73 nt0.84□□□□□ -2.27
TFA1P36100 tT(AGU)I2tT(AGU)I2 73 nt0.84□□□□□ -2.27
TFA1P36100 tT(AGU)JtT(AGU)J 73 nt0.84□□□□□ -2.27
TFA1P36100 tT(AGU)N1tT(AGU)N1 73 nt0.84□□□□□ -2.27
TFA1P36100 tT(AGU)N2tT(AGU)N2 73 nt0.84□□□□□ -2.27
TFA1P36100 tT(AGU)O1tT(AGU)O1 73 nt0.84□□□□□ -2.27
TFA1P36100 tT(AGU)O2tT(AGU)O2 73 nt0.84□□□□□ -2.27
TFA1P36100 YOR316C-AYOR316C-A 210 nt0.81□□□□□ -2.28
TFA1P36100 THO2YNL139C 4794 nt0.79□□□□□ -2.28
TFA1P36100 tF(GAA)BtF(GAA)B 73 nt0.73□□□□□ -2.29
TFA1P36100 tF(GAA)FtF(GAA)F 73 nt0.73□□□□□ -2.29
TFA1P36100 tF(GAA)GtF(GAA)G 73 nt0.73□□□□□ -2.29
TFA1P36100 tF(GAA)H1tF(GAA)H1 73 nt0.73□□□□□ -2.29
TFA1P36100 tF(GAA)H2tF(GAA)H2 73 nt0.73□□□□□ -2.29
TFA1P36100 tF(GAA)MtF(GAA)M 73 nt0.73□□□□□ -2.29
TFA1P36100 tF(GAA)P1tF(GAA)P1 73 nt0.73□□□□□ -2.29
TFA1P36100 tF(GAA)P2tF(GAA)P2 73 nt0.73□□□□□ -2.29
TFA1P36100 FMP27YLR454W 7887 nt0.72□□□□□ -2.29
TFA1P36100 snR77snR77 88 nt0.69□□□□□ -2.3
TFA1P36100 snR128snR128 126 nt0.68□□□□□ -2.3
TFA1P36100 YOL013W-AYOL013W-A 192 nt0.67□□□□□ -2.3
TFA1P36100 SBH2YER019C-A 267 nt0.64□□□□□ -2.31
TFA1P36100 YKL145W-AYKL145W-A 93 nt0.62□□□□□ -2.31
TFA1P36100 YOL014WYOL014W 375 nt0.55□□□□□ -2.32
TFA1P36100 PAU9YBL108C-A 129 nt0.54□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 30.5 ms