Protein–RNA interactions for Protein: P23638

PRE9, Proteasome subunit alpha type-3, yeastyeast

Known RBP Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRE9P23638 YOR192C-BYOR192C-B 5313 nt1.03□□□□□ -2.24
PRE9P23638 YJL077W-AYJL077W-A 87 nt1.02□□□□□ -2.25
PRE9P23638 SIP4YJL089W 2490 nt1.01□□□□□ -2.25
PRE9P23638 PET111YMR257C 2403 nt1.01□□□□□ -2.25
PRE9P23638 IQG1YPL242C 4488 nt1.01□□□□□ -2.25
PRE9P23638 YIL142C-AYIL142C-A 333 nt1□□□□□ -2.25
PRE9P23638 RDS3YPR094W 324 nt1□□□□□ -2.25
PRE9P23638 snR62snR62 100 nt0.98□□□□□ -2.25
PRE9P23638 BEM2YER155C 6504 nt0.98□□□□□ -2.25
PRE9P23638 IML1YJR138W 4755 nt0.97□□□□□ -2.25
PRE9P23638 YNL054W-BYNL054W-B 5250 nt0.96□□□□□ -2.26
PRE9P23638 YDR371C-AYDR371C-A 105 nt0.96□□□□□ -2.26
PRE9P23638 tH(GUG)E1tH(GUG)E1 72 nt0.96□□□□□ -2.26
PRE9P23638 tH(GUG)E2tH(GUG)E2 72 nt0.96□□□□□ -2.26
PRE9P23638 tH(GUG)G1tH(GUG)G1 72 nt0.96□□□□□ -2.26
PRE9P23638 tH(GUG)G2tH(GUG)G2 72 nt0.96□□□□□ -2.26
PRE9P23638 tH(GUG)HtH(GUG)H 72 nt0.96□□□□□ -2.26
PRE9P23638 tH(GUG)KtH(GUG)K 72 nt0.96□□□□□ -2.26
PRE9P23638 tH(GUG)MtH(GUG)M 72 nt0.96□□□□□ -2.26
PRE9P23638 YBL100W-CYBL100W-C 120 nt0.95□□□□□ -2.26
PRE9P23638 YDL159C-BYDL159C-B 177 nt0.94□□□□□ -2.26
PRE9P23638 PAU12YGR294W 363 nt0.93□□□□□ -2.26
PRE9P23638 YLL066W-BYLL066W-B 171 nt0.93□□□□□ -2.26
PRE9P23638 YLR299C-AYLR299C-A 93 nt0.93□□□□□ -2.26
PRE9P23638 YOL164W-AYOL164W-A 183 nt0.93□□□□□ -2.26
PRE9P23638 PAU24YBR301W 363 nt0.93□□□□□ -2.26
PRE9P23638 YBL100W-BYBL100W-B 5313 nt0.92□□□□□ -2.26
PRE9P23638 snR45snR45 172 nt0.9□□□□□ -2.27
PRE9P23638 MLP1YKR095W 5628 nt0.9□□□□□ -2.27
PRE9P23638 tQ(UUG)QtQ(UUG)Q 76 nt0.88□□□□□ -2.27
PRE9P23638 tV(UAC)BtV(UAC)B 74 nt0.87□□□□□ -2.27
PRE9P23638 tV(UAC)DtV(UAC)D 74 nt0.87□□□□□ -2.27
PRE9P23638 ORC3YLL004W 1851 nt0.86□□□□□ -2.27
PRE9P23638 YGR240C-AYGR240C-A 201 nt0.86□□□□□ -2.27
PRE9P23638 YDR034C-AYDR034C-A 177 nt0.79□□□□□ -2.28
PRE9P23638 YPR159C-AYPR159C-A 102 nt0.79□□□□□ -2.28
PRE9P23638 snR47snR47 99 nt0.78□□□□□ -2.28
PRE9P23638 YER090C-AYER090C-A 90 nt0.74□□□□□ -2.29
PRE9P23638 YHR180C-BYHR180C-B 105 nt0.71□□□□□ -2.3
PRE9P23638 YML054C-AYML054C-A 159 nt0.7□□□□□ -2.3
PRE9P23638 YOR186C-AYOR186C-A 210 nt0.69□□□□□ -2.3
PRE9P23638 MYO1YHR023W 5787 nt0.68□□□□□ -2.3
PRE9P23638 ESP1YGR098C 4893 nt0.67□□□□□ -2.3
PRE9P23638 YMR272W-AYMR272W-A 114 nt0.67□□□□□ -2.3
PRE9P23638 snR50snR50 90 nt0.67□□□□□ -2.3
PRE9P23638 MLP2YIL149C 5040 nt0.66□□□□□ -2.3
PRE9P23638 AI1Q0050 2505 nt0.66□□□□□ -2.3
PRE9P23638 UTP10YJL109C 5310 nt0.66□□□□□ -2.3
PRE9P23638 YMR160WYMR160W 2451 nt0.63□□□□□ -2.31
PRE9P23638 YBR109W-AYBR109W-A 225 nt0.61□□□□□ -2.31
PRE9P23638 RPL41AYDL184C 78 nt0.58□□□□□ -2.32
PRE9P23638 UTP20YBL004W 7482 nt0.58□□□□□ -2.32
PRE9P23638 SOV1YMR066W 2697 nt0.57□□□□□ -2.32
PRE9P23638 tT(AGU)BtT(AGU)B 73 nt0.56□□□□□ -2.32
PRE9P23638 tT(AGU)CtT(AGU)C 73 nt0.56□□□□□ -2.32
PRE9P23638 tT(AGU)DtT(AGU)D 73 nt0.56□□□□□ -2.32
PRE9P23638 tT(AGU)HtT(AGU)H 73 nt0.56□□□□□ -2.32
PRE9P23638 tT(AGU)I1tT(AGU)I1 73 nt0.56□□□□□ -2.32
PRE9P23638 tT(AGU)I2tT(AGU)I2 73 nt0.56□□□□□ -2.32
PRE9P23638 tT(AGU)JtT(AGU)J 73 nt0.56□□□□□ -2.32
PRE9P23638 tT(AGU)N1tT(AGU)N1 73 nt0.56□□□□□ -2.32
PRE9P23638 tT(AGU)N2tT(AGU)N2 73 nt0.56□□□□□ -2.32
PRE9P23638 tT(AGU)O1tT(AGU)O1 73 nt0.56□□□□□ -2.32
PRE9P23638 tT(AGU)O2tT(AGU)O2 73 nt0.56□□□□□ -2.32
PRE9P23638 YBR296C-AYBR296C-A 120 nt0.55□□□□□ -2.32
PRE9P23638 snR67snR67 82 nt0.53□□□□□ -2.32
PRE9P23638 snR38snR38 95 nt0.51□□□□□ -2.33
PRE9P23638 FMP27YLR454W 7887 nt0.5□□□□□ -2.33
PRE9P23638 YKL225WYKL225W 348 nt0.48□□□□□ -2.33
PRE9P23638 snR64snR64 101 nt0.45□□□□□ -2.34
PRE9P23638 YML100W-AYML100W-A 174 nt0.43□□□□□ -2.34
PRE9P23638 YOL013W-AYOL013W-A 192 nt0.4□□□□□ -2.35
PRE9P23638 snR53snR53 91 nt0.39□□□□□ -2.35
PRE9P23638 YKL145W-AYKL145W-A 93 nt0.36□□□□□ -2.35
PRE9P23638 tF(GAA)BtF(GAA)B 73 nt0.35□□□□□ -2.35
PRE9P23638 tF(GAA)FtF(GAA)F 73 nt0.35□□□□□ -2.35
PRE9P23638 tF(GAA)GtF(GAA)G 73 nt0.35□□□□□ -2.35
PRE9P23638 tF(GAA)H1tF(GAA)H1 73 nt0.35□□□□□ -2.35
PRE9P23638 tF(GAA)H2tF(GAA)H2 73 nt0.35□□□□□ -2.35
PRE9P23638 tF(GAA)MtF(GAA)M 73 nt0.35□□□□□ -2.35
PRE9P23638 tF(GAA)P1tF(GAA)P1 73 nt0.35□□□□□ -2.35
PRE9P23638 tF(GAA)P2tF(GAA)P2 73 nt0.35□□□□□ -2.35
PRE9P23638 THO2YNL139C 4794 nt0.34□□□□□ -2.36
PRE9P23638 snR128snR128 126 nt0.31□□□□□ -2.36
PRE9P23638 SKI7YOR076C 2244 nt0.29□□□□□ -2.36
PRE9P23638 YOL014WYOL014W 375 nt0.28□□□□□ -2.36
PRE9P23638 YKL106C-AYKL106C-A 120 nt0.1□□□□□ -2.39
PRE9P23638 YDL159W-AYDL159W-A 132 nt0.09□□□□□ -2.4
PRE9P23638 PAU9YBL108C-A 129 nt0.09□□□□□ -2.4
PRE9P23638 YER078W-AYER078W-A 165 nt0.07□□□□□ -2.4
PRE9P23638 YGR122C-AYGR122C-A 129 nt0.04□□□□□ -2.4
PRE9P23638 YJL113WYJL113W 4647 nt0.02□□□□□ -2.41
PRE9P23638 tA(UGC)QtA(UGC)Q 76 nt-0.04□□□□□ -2.42
PRE9P23638 YOR376W-AYOR376W-A 156 nt-0.05□□□□□ -2.42
PRE9P23638 YLR149C-AYLR149C-A 87 nt-0.07□□□□□ -2.42
PRE9P23638 SBH2YER019C-A 267 nt-0.13□□□□□ -2.43
PRE9P23638 YOR316C-AYOR316C-A 210 nt-0.14□□□□□ -2.43
PRE9P23638 YDL114W-AYDL114W-A 114 nt-0.21□□□□□ -2.44
PRE9P23638 YHL009W-BYHL009W-B 5409 nt-0.21□□□□□ -2.44
PRE9P23638 tV(UAC)QtV(UAC)Q 76 nt-0.22□□□□□ -2.44
Retrieved 100 of 7,029 protein–RNA pairs in 58.8 ms