Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Cap2-205ENSMUST00000225824 1634 ntBASIC23.73■■□□□ 1.39
Rrp8Q9DB85 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rrp8Q9DB85 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Rrp8Q9DB85 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rrp8Q9DB85 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rrp8Q9DB85 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Rrp8Q9DB85 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.72■■□□□ 1.39
Rrp8Q9DB85 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Rrp8Q9DB85 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Rrp8Q9DB85 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rrp8Q9DB85 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rrp8Q9DB85 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Rrp8Q9DB85 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.68■■□□□ 1.38
Rrp8Q9DB85 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rrp8Q9DB85 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.68■■□□□ 1.38
Rrp8Q9DB85 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rrp8Q9DB85 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Rrp8Q9DB85 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.67■■□□□ 1.38
Rrp8Q9DB85 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rrp8Q9DB85 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.66■■□□□ 1.38
Rrp8Q9DB85 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Rrp8Q9DB85 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Rrp8Q9DB85 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Rrp8Q9DB85 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Rrp8Q9DB85 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC23.64■■□□□ 1.37
Rrp8Q9DB85 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Rrp8Q9DB85 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Rrp8Q9DB85 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Rrp8Q9DB85 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rrp8Q9DB85 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.6■■□□□ 1.37
Rrp8Q9DB85 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
Rrp8Q9DB85 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rrp8Q9DB85 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rrp8Q9DB85 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Rrp8Q9DB85 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rrp8Q9DB85 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rrp8Q9DB85 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.58■■□□□ 1.37
Rrp8Q9DB85 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.57■■□□□ 1.36
Rrp8Q9DB85 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Rrp8Q9DB85 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC23.57■■□□□ 1.36
Rrp8Q9DB85 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rrp8Q9DB85 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rrp8Q9DB85 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rrp8Q9DB85 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
Rrp8Q9DB85 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rrp8Q9DB85 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rrp8Q9DB85 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rrp8Q9DB85 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rrp8Q9DB85 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC23.54■■□□□ 1.36
Rrp8Q9DB85 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.54■■□□□ 1.36
Rrp8Q9DB85 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rrp8Q9DB85 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.53■■□□□ 1.36
Rrp8Q9DB85 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rrp8Q9DB85 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rrp8Q9DB85 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rrp8Q9DB85 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
Rrp8Q9DB85 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rrp8Q9DB85 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rrp8Q9DB85 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rrp8Q9DB85 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rrp8Q9DB85 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Rrp8Q9DB85 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC23.5■■□□□ 1.35
Rrp8Q9DB85 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rrp8Q9DB85 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rrp8Q9DB85 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
Rrp8Q9DB85 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.49■■□□□ 1.35
Rrp8Q9DB85 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Rrp8Q9DB85 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rrp8Q9DB85 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rrp8Q9DB85 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Rrp8Q9DB85 Scarna2-201ENSMUST00000157560 414 ntBASIC23.48■■□□□ 1.35
Rrp8Q9DB85 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rrp8Q9DB85 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.47■■□□□ 1.35
Rrp8Q9DB85 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Rrp8Q9DB85 Gm11687-201ENSMUST00000118911 886 ntBASIC23.46■■□□□ 1.35
Rrp8Q9DB85 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.46■■□□□ 1.35
Rrp8Q9DB85 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rrp8Q9DB85 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Rrp8Q9DB85 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Rrp8Q9DB85 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Rrp8Q9DB85 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rrp8Q9DB85 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rrp8Q9DB85 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rrp8Q9DB85 Gm4799-201ENSMUST00000095396 657 ntBASIC23.44■■□□□ 1.34
Rrp8Q9DB85 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Rrp8Q9DB85 Gm9806-201ENSMUST00000051080 552 ntBASIC23.43■■□□□ 1.34
Rrp8Q9DB85 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Rrp8Q9DB85 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.42■■□□□ 1.34
Rrp8Q9DB85 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rrp8Q9DB85 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Rrp8Q9DB85 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.41■■□□□ 1.34
Rrp8Q9DB85 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Rrp8Q9DB85 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rrp8Q9DB85 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Rrp8Q9DB85 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rrp8Q9DB85 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.39■■□□□ 1.34
Rrp8Q9DB85 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.39■■□□□ 1.33
Rrp8Q9DB85 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Rrp8Q9DB85 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Rrp8Q9DB85 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms