Protein–RNA interactions for Protein: Q9D9P8

Llcfc1, LLLL and CFNLAS motif-containing protein 1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Llcfc1Q9D9P8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Llcfc1Q9D9P8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC25.25■■□□□ 1.63
Llcfc1Q9D9P8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Llcfc1Q9D9P8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC25.23■■□□□ 1.63
Llcfc1Q9D9P8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Llcfc1Q9D9P8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Llcfc1Q9D9P8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
Llcfc1Q9D9P8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Llcfc1Q9D9P8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC25.23■■□□□ 1.63
Llcfc1Q9D9P8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Llcfc1Q9D9P8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Llcfc1Q9D9P8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Llcfc1Q9D9P8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.63
Llcfc1Q9D9P8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Llcfc1Q9D9P8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Llcfc1Q9D9P8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Llcfc1Q9D9P8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Llcfc1Q9D9P8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.19■■□□□ 1.62
Llcfc1Q9D9P8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Llcfc1Q9D9P8 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.18■■□□□ 1.62
Llcfc1Q9D9P8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Llcfc1Q9D9P8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Llcfc1Q9D9P8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Llcfc1Q9D9P8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Llcfc1Q9D9P8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC25.15■■□□□ 1.62
Llcfc1Q9D9P8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
Llcfc1Q9D9P8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
Llcfc1Q9D9P8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC25.15■■□□□ 1.62
Llcfc1Q9D9P8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Llcfc1Q9D9P8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Llcfc1Q9D9P8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Llcfc1Q9D9P8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Llcfc1Q9D9P8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Llcfc1Q9D9P8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Llcfc1Q9D9P8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Llcfc1Q9D9P8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Llcfc1Q9D9P8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Llcfc1Q9D9P8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Llcfc1Q9D9P8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Llcfc1Q9D9P8 AC157572.2-201ENSMUST00000226970 908 ntBASIC25.11■■□□□ 1.61
Llcfc1Q9D9P8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.1■■□□□ 1.61
Llcfc1Q9D9P8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.1■■□□□ 1.61
Llcfc1Q9D9P8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Llcfc1Q9D9P8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC25.1■■□□□ 1.61
Llcfc1Q9D9P8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.09■■□□□ 1.61
Llcfc1Q9D9P8 Zfp131-205ENSMUST00000223812 663 ntBASIC25.09■■□□□ 1.61
Llcfc1Q9D9P8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
Llcfc1Q9D9P8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.08■■□□□ 1.61
Llcfc1Q9D9P8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
Llcfc1Q9D9P8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Llcfc1Q9D9P8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
Llcfc1Q9D9P8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Llcfc1Q9D9P8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Llcfc1Q9D9P8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25.05■■□□□ 1.6
Llcfc1Q9D9P8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25.04■■□□□ 1.6
Llcfc1Q9D9P8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC25.04■■□□□ 1.6
Llcfc1Q9D9P8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Llcfc1Q9D9P8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Llcfc1Q9D9P8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Llcfc1Q9D9P8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Llcfc1Q9D9P8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25■■□□□ 1.59
Llcfc1Q9D9P8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Llcfc1Q9D9P8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.99■■□□□ 1.59
Llcfc1Q9D9P8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Llcfc1Q9D9P8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Llcfc1Q9D9P8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.98■■□□□ 1.59
Llcfc1Q9D9P8 Gm9397-201ENSMUST00000200125 605 ntBASIC24.97■■□□□ 1.59
Llcfc1Q9D9P8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Llcfc1Q9D9P8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.97■■□□□ 1.59
Llcfc1Q9D9P8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Llcfc1Q9D9P8 Gm24970-201ENSMUST00000175582 82 ntBASIC24.96■■□□□ 1.59
Llcfc1Q9D9P8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Llcfc1Q9D9P8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Llcfc1Q9D9P8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.96■■□□□ 1.59
Llcfc1Q9D9P8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Llcfc1Q9D9P8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Llcfc1Q9D9P8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Llcfc1Q9D9P8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Llcfc1Q9D9P8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Llcfc1Q9D9P8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
Llcfc1Q9D9P8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Llcfc1Q9D9P8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Llcfc1Q9D9P8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.93■■□□□ 1.58
Llcfc1Q9D9P8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Llcfc1Q9D9P8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.92■■□□□ 1.58
Llcfc1Q9D9P8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Llcfc1Q9D9P8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
Llcfc1Q9D9P8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.91■■□□□ 1.58
Llcfc1Q9D9P8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Llcfc1Q9D9P8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Llcfc1Q9D9P8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Llcfc1Q9D9P8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Llcfc1Q9D9P8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Llcfc1Q9D9P8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Llcfc1Q9D9P8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Llcfc1Q9D9P8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Llcfc1Q9D9P8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Llcfc1Q9D9P8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.86■■□□□ 1.57
Llcfc1Q9D9P8 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.86■■□□□ 1.57
Llcfc1Q9D9P8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms