Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Chd1lQ9CXF7 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
Chd1lQ9CXF7 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Chd1lQ9CXF7 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26.97■■□□□ 1.91
Chd1lQ9CXF7 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Chd1lQ9CXF7 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Chd1lQ9CXF7 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
Chd1lQ9CXF7 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Chd1lQ9CXF7 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Chd1lQ9CXF7 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
Chd1lQ9CXF7 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Chd1lQ9CXF7 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Chd1lQ9CXF7 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Chd1lQ9CXF7 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Chd1lQ9CXF7 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Chd1lQ9CXF7 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Chd1lQ9CXF7 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Chd1lQ9CXF7 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC26.91■■□□□ 1.9
Chd1lQ9CXF7 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
Chd1lQ9CXF7 Il17rd-202ENSMUST00000223942 2186 ntBASIC26.91■■□□□ 1.9
Chd1lQ9CXF7 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Chd1lQ9CXF7 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Chd1lQ9CXF7 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Chd1lQ9CXF7 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Chd1lQ9CXF7 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Chd1lQ9CXF7 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Chd1lQ9CXF7 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Chd1lQ9CXF7 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Chd1lQ9CXF7 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Chd1lQ9CXF7 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Chd1lQ9CXF7 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
Chd1lQ9CXF7 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Chd1lQ9CXF7 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Chd1lQ9CXF7 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
Chd1lQ9CXF7 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
Chd1lQ9CXF7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Chd1lQ9CXF7 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Chd1lQ9CXF7 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Chd1lQ9CXF7 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Chd1lQ9CXF7 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Chd1lQ9CXF7 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Chd1lQ9CXF7 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.84■■□□□ 1.89
Chd1lQ9CXF7 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Chd1lQ9CXF7 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Chd1lQ9CXF7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC26.83■■□□□ 1.89
Chd1lQ9CXF7 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Chd1lQ9CXF7 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.83■■□□□ 1.89
Chd1lQ9CXF7 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
Chd1lQ9CXF7 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC26.82■■□□□ 1.88
Chd1lQ9CXF7 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
Chd1lQ9CXF7 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Chd1lQ9CXF7 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Chd1lQ9CXF7 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Chd1lQ9CXF7 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Chd1lQ9CXF7 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.8■■□□□ 1.88
Chd1lQ9CXF7 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
Chd1lQ9CXF7 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Chd1lQ9CXF7 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
Chd1lQ9CXF7 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Chd1lQ9CXF7 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Chd1lQ9CXF7 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Chd1lQ9CXF7 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Chd1lQ9CXF7 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Chd1lQ9CXF7 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
Chd1lQ9CXF7 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Chd1lQ9CXF7 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Chd1lQ9CXF7 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
Chd1lQ9CXF7 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Chd1lQ9CXF7 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
Chd1lQ9CXF7 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Chd1lQ9CXF7 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Chd1lQ9CXF7 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Chd1lQ9CXF7 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Chd1lQ9CXF7 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Chd1lQ9CXF7 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Chd1lQ9CXF7 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
Chd1lQ9CXF7 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Chd1lQ9CXF7 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Chd1lQ9CXF7 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
Chd1lQ9CXF7 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Chd1lQ9CXF7 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
Chd1lQ9CXF7 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Chd1lQ9CXF7 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Chd1lQ9CXF7 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
Chd1lQ9CXF7 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC26.69■■□□□ 1.86
Chd1lQ9CXF7 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
Chd1lQ9CXF7 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Chd1lQ9CXF7 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Chd1lQ9CXF7 Gm17641-201ENSMUST00000166328 2350 ntBASIC26.67■■□□□ 1.86
Chd1lQ9CXF7 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Chd1lQ9CXF7 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Chd1lQ9CXF7 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC26.66■■□□□ 1.86
Chd1lQ9CXF7 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Chd1lQ9CXF7 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
Chd1lQ9CXF7 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
Chd1lQ9CXF7 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Chd1lQ9CXF7 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
Chd1lQ9CXF7 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Chd1lQ9CXF7 Gm8109-201ENSMUST00000194076 746 ntBASIC26.63■■□□□ 1.85
Chd1lQ9CXF7 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms