Protein–RNA interactions for Protein: Q9CQC0

Tpbpb, Trophoblast-specific protein beta, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpbQ9CQC0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TpbpbQ9CQC0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
TpbpbQ9CQC0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TpbpbQ9CQC0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TpbpbQ9CQC0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
TpbpbQ9CQC0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TpbpbQ9CQC0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TpbpbQ9CQC0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TpbpbQ9CQC0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TpbpbQ9CQC0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TpbpbQ9CQC0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TpbpbQ9CQC0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TpbpbQ9CQC0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
TpbpbQ9CQC0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TpbpbQ9CQC0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TpbpbQ9CQC0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TpbpbQ9CQC0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TpbpbQ9CQC0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.14■□□□□ 0.97
TpbpbQ9CQC0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TpbpbQ9CQC0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TpbpbQ9CQC0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TpbpbQ9CQC0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TpbpbQ9CQC0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TpbpbQ9CQC0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TpbpbQ9CQC0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TpbpbQ9CQC0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TpbpbQ9CQC0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TpbpbQ9CQC0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TpbpbQ9CQC0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
TpbpbQ9CQC0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TpbpbQ9CQC0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TpbpbQ9CQC0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TpbpbQ9CQC0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
TpbpbQ9CQC0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TpbpbQ9CQC0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TpbpbQ9CQC0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TpbpbQ9CQC0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TpbpbQ9CQC0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TpbpbQ9CQC0 Gm26115-201ENSMUST00000175605 87 ntBASIC21.09■□□□□ 0.97
TpbpbQ9CQC0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TpbpbQ9CQC0 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.08■□□□□ 0.97
TpbpbQ9CQC0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TpbpbQ9CQC0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TpbpbQ9CQC0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TpbpbQ9CQC0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
TpbpbQ9CQC0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TpbpbQ9CQC0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TpbpbQ9CQC0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.06■□□□□ 0.96
TpbpbQ9CQC0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TpbpbQ9CQC0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
TpbpbQ9CQC0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TpbpbQ9CQC0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TpbpbQ9CQC0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TpbpbQ9CQC0 Gm8109-201ENSMUST00000194076 746 ntBASIC21.04■□□□□ 0.96
TpbpbQ9CQC0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TpbpbQ9CQC0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
TpbpbQ9CQC0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
TpbpbQ9CQC0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TpbpbQ9CQC0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TpbpbQ9CQC0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TpbpbQ9CQC0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TpbpbQ9CQC0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.02■□□□□ 0.96
TpbpbQ9CQC0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
TpbpbQ9CQC0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TpbpbQ9CQC0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TpbpbQ9CQC0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TpbpbQ9CQC0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TpbpbQ9CQC0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21■□□□□ 0.95
TpbpbQ9CQC0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21■□□□□ 0.95
TpbpbQ9CQC0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21■□□□□ 0.95
TpbpbQ9CQC0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TpbpbQ9CQC0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TpbpbQ9CQC0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TpbpbQ9CQC0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TpbpbQ9CQC0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TpbpbQ9CQC0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TpbpbQ9CQC0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.97■□□□□ 0.95
TpbpbQ9CQC0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TpbpbQ9CQC0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
TpbpbQ9CQC0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TpbpbQ9CQC0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TpbpbQ9CQC0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TpbpbQ9CQC0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
TpbpbQ9CQC0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TpbpbQ9CQC0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TpbpbQ9CQC0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TpbpbQ9CQC0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TpbpbQ9CQC0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TpbpbQ9CQC0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
TpbpbQ9CQC0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TpbpbQ9CQC0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TpbpbQ9CQC0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TpbpbQ9CQC0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TpbpbQ9CQC0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TpbpbQ9CQC0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.91■□□□□ 0.94
TpbpbQ9CQC0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
TpbpbQ9CQC0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TpbpbQ9CQC0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
TpbpbQ9CQC0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
TpbpbQ9CQC0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms