Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Pcdh15Q99PJ1 Gm12366-201ENSMUST00000121722 873 ntBASIC28.58■■■□□ 2.17
Pcdh15Q99PJ1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC28.58■■■□□ 2.17
Pcdh15Q99PJ1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC28.58■■■□□ 2.17
Pcdh15Q99PJ1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC28.58■■■□□ 2.17
Pcdh15Q99PJ1 Gm5786-201ENSMUST00000085368 882 ntBASIC28.58■■■□□ 2.17
Pcdh15Q99PJ1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Pcdh15Q99PJ1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Pcdh15Q99PJ1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Pcdh15Q99PJ1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Pcdh15Q99PJ1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Pcdh15Q99PJ1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Pcdh15Q99PJ1 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Pcdh15Q99PJ1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Pcdh15Q99PJ1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Pcdh15Q99PJ1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Pcdh15Q99PJ1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Pcdh15Q99PJ1 Gm6658-202ENSMUST00000209493 1885 ntBASIC28.52■■■□□ 2.16
Pcdh15Q99PJ1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Pcdh15Q99PJ1 Gm30023-201ENSMUST00000197970 889 ntBASIC28.5■■■□□ 2.15
Pcdh15Q99PJ1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Pcdh15Q99PJ1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC28.49■■■□□ 2.15
Pcdh15Q99PJ1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Pcdh15Q99PJ1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Pcdh15Q99PJ1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Pcdh15Q99PJ1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Pcdh15Q99PJ1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Pcdh15Q99PJ1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC28.47■■■□□ 2.15
Pcdh15Q99PJ1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC28.47■■■□□ 2.15
Pcdh15Q99PJ1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Pcdh15Q99PJ1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC28.44■■■□□ 2.14
Pcdh15Q99PJ1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
Pcdh15Q99PJ1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Pcdh15Q99PJ1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
Pcdh15Q99PJ1 Scarna2-201ENSMUST00000157560 414 ntBASIC28.42■■■□□ 2.14
Pcdh15Q99PJ1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Pcdh15Q99PJ1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Pcdh15Q99PJ1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
Pcdh15Q99PJ1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Pcdh15Q99PJ1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Pcdh15Q99PJ1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC28.41■■■□□ 2.14
Pcdh15Q99PJ1 Gm4799-201ENSMUST00000095396 657 ntBASIC28.41■■■□□ 2.14
Pcdh15Q99PJ1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Pcdh15Q99PJ1 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
Pcdh15Q99PJ1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC28.39■■■□□ 2.14
Pcdh15Q99PJ1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC28.39■■■□□ 2.13
Pcdh15Q99PJ1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Pcdh15Q99PJ1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Pcdh15Q99PJ1 Gm11687-201ENSMUST00000118911 886 ntBASIC28.37■■■□□ 2.13
Pcdh15Q99PJ1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC28.37■■■□□ 2.13
Pcdh15Q99PJ1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Pcdh15Q99PJ1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC28.35■■■□□ 2.13
Pcdh15Q99PJ1 Gm9806-201ENSMUST00000051080 552 ntBASIC28.35■■■□□ 2.13
Pcdh15Q99PJ1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Pcdh15Q99PJ1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Pcdh15Q99PJ1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC28.33■■■□□ 2.13
Pcdh15Q99PJ1 Pkd1-207ENSMUST00000228550 1050 ntBASIC28.31■■■□□ 2.12
Pcdh15Q99PJ1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC28.3■■■□□ 2.12
Pcdh15Q99PJ1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Pcdh15Q99PJ1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Pcdh15Q99PJ1 Gm45364-201ENSMUST00000210883 159 ntBASIC28.3■■■□□ 2.12
Pcdh15Q99PJ1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Pcdh15Q99PJ1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Pcdh15Q99PJ1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Pcdh15Q99PJ1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC28.27■■■□□ 2.12
Pcdh15Q99PJ1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC28.27■■■□□ 2.12
Pcdh15Q99PJ1 Gm16437-201ENSMUST00000025669 507 ntBASIC28.27■■■□□ 2.12
Pcdh15Q99PJ1 Gm7332-201ENSMUST00000118351 454 ntBASIC28.26■■■□□ 2.11
Pcdh15Q99PJ1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC28.26■■■□□ 2.11
Pcdh15Q99PJ1 Gm27502-201ENSMUST00000183495 199 ntBASIC28.26■■■□□ 2.11
Pcdh15Q99PJ1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Pcdh15Q99PJ1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC28.25■■■□□ 2.11
Pcdh15Q99PJ1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Pcdh15Q99PJ1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Pcdh15Q99PJ1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Pcdh15Q99PJ1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
Pcdh15Q99PJ1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Pcdh15Q99PJ1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Pcdh15Q99PJ1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
Pcdh15Q99PJ1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Pcdh15Q99PJ1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Pcdh15Q99PJ1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Pcdh15Q99PJ1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Pcdh15Q99PJ1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Pcdh15Q99PJ1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Pcdh15Q99PJ1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC28.18■■■□□ 2.1
Pcdh15Q99PJ1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
Pcdh15Q99PJ1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
Pcdh15Q99PJ1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Pcdh15Q99PJ1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC28.16■■■□□ 2.1
Pcdh15Q99PJ1 Pcf11-205ENSMUST00000208255 1720 ntBASIC28.16■■■□□ 2.1
Pcdh15Q99PJ1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Pcdh15Q99PJ1 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Pcdh15Q99PJ1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Pcdh15Q99PJ1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Pcdh15Q99PJ1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Pcdh15Q99PJ1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC28.14■■■□□ 2.09
Pcdh15Q99PJ1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Pcdh15Q99PJ1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Pcdh15Q99PJ1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms