Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Cdh23Q99PF4 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC25.45■■□□□ 1.66
Cdh23Q99PF4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Cdh23Q99PF4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
Cdh23Q99PF4 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Cdh23Q99PF4 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Cdh23Q99PF4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Cdh23Q99PF4 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC25.43■■□□□ 1.66
Cdh23Q99PF4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Cdh23Q99PF4 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Cdh23Q99PF4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Cdh23Q99PF4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Cdh23Q99PF4 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Cdh23Q99PF4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Cdh23Q99PF4 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC25.4■■□□□ 1.66
Cdh23Q99PF4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Cdh23Q99PF4 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Cdh23Q99PF4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Cdh23Q99PF4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.39■■□□□ 1.65
Cdh23Q99PF4 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
Cdh23Q99PF4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
Cdh23Q99PF4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC25.38■■□□□ 1.65
Cdh23Q99PF4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Cdh23Q99PF4 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Cdh23Q99PF4 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
Cdh23Q99PF4 Gm5812-201ENSMUST00000061073 957 ntBASIC25.36■■□□□ 1.65
Cdh23Q99PF4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Cdh23Q99PF4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC25.34■■□□□ 1.65
Cdh23Q99PF4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC25.34■■□□□ 1.65
Cdh23Q99PF4 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Cdh23Q99PF4 Scarna2-201ENSMUST00000157560 414 ntBASIC25.34■■□□□ 1.65
Cdh23Q99PF4 Gm9806-201ENSMUST00000051080 552 ntBASIC25.34■■□□□ 1.65
Cdh23Q99PF4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC25.34■■□□□ 1.65
Cdh23Q99PF4 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cdh23Q99PF4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.33■■□□□ 1.65
Cdh23Q99PF4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Cdh23Q99PF4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
Cdh23Q99PF4 Gm11687-201ENSMUST00000118911 886 ntBASIC25.32■■□□□ 1.64
Cdh23Q99PF4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cdh23Q99PF4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cdh23Q99PF4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC25.31■■□□□ 1.64
Cdh23Q99PF4 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cdh23Q99PF4 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Cdh23Q99PF4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Cdh23Q99PF4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Cdh23Q99PF4 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC25.29■■□□□ 1.64
Cdh23Q99PF4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cdh23Q99PF4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Cdh23Q99PF4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cdh23Q99PF4 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
Cdh23Q99PF4 Particl-201ENSMUST00000205370 1560 ntBASIC25.28■■□□□ 1.64
Cdh23Q99PF4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25.27■■□□□ 1.64
Cdh23Q99PF4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Cdh23Q99PF4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Cdh23Q99PF4 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Cdh23Q99PF4 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
Cdh23Q99PF4 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Cdh23Q99PF4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Cdh23Q99PF4 Gm7332-201ENSMUST00000118351 454 ntBASIC25.21■■□□□ 1.63
Cdh23Q99PF4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
Cdh23Q99PF4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Cdh23Q99PF4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Cdh23Q99PF4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Cdh23Q99PF4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Cdh23Q99PF4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Cdh23Q99PF4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Cdh23Q99PF4 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Cdh23Q99PF4 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC25.18■■□□□ 1.62
Cdh23Q99PF4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC25.18■■□□□ 1.62
Cdh23Q99PF4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Cdh23Q99PF4 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC25.16■■□□□ 1.62
Cdh23Q99PF4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Cdh23Q99PF4 Gm16437-201ENSMUST00000025669 507 ntBASIC25.16■■□□□ 1.62
Cdh23Q99PF4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Cdh23Q99PF4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Cdh23Q99PF4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC25.14■■□□□ 1.62
Cdh23Q99PF4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Cdh23Q99PF4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Cdh23Q99PF4 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Cdh23Q99PF4 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cdh23Q99PF4 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Cdh23Q99PF4 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
Cdh23Q99PF4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC25.11■■□□□ 1.61
Cdh23Q99PF4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Cdh23Q99PF4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
Cdh23Q99PF4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC25.08■■□□□ 1.61
Cdh23Q99PF4 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Cdh23Q99PF4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Cdh23Q99PF4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Cdh23Q99PF4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Cdh23Q99PF4 Gm27502-201ENSMUST00000183495 199 ntBASIC25.06■■□□□ 1.6
Cdh23Q99PF4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC25.05■■□□□ 1.6
Cdh23Q99PF4 Gm14523-201ENSMUST00000117260 558 ntBASIC25.05■■□□□ 1.6
Cdh23Q99PF4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cdh23Q99PF4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC25.04■■□□□ 1.6
Cdh23Q99PF4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Cdh23Q99PF4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
Cdh23Q99PF4 Gm45364-201ENSMUST00000210883 159 ntBASIC25.03■■□□□ 1.6
Cdh23Q99PF4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Cdh23Q99PF4 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms