Protein–RNA interactions for Protein: Q99NC0

Vgll1, Transcription cofactor vestigial-like protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vgll1Q99NC0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vgll1Q99NC0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Vgll1Q99NC0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Vgll1Q99NC0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
Vgll1Q99NC0 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.36■□□□□ 0.85
Vgll1Q99NC0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Vgll1Q99NC0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Vgll1Q99NC0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Vgll1Q99NC0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Vgll1Q99NC0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.35■□□□□ 0.85
Vgll1Q99NC0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vgll1Q99NC0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vgll1Q99NC0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vgll1Q99NC0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Vgll1Q99NC0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
Vgll1Q99NC0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.34■□□□□ 0.85
Vgll1Q99NC0 Gm9397-201ENSMUST00000200125 605 ntBASIC20.34■□□□□ 0.85
Vgll1Q99NC0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vgll1Q99NC0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vgll1Q99NC0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vgll1Q99NC0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.33■□□□□ 0.85
Vgll1Q99NC0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.33■□□□□ 0.85
Vgll1Q99NC0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vgll1Q99NC0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vgll1Q99NC0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vgll1Q99NC0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vgll1Q99NC0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Vgll1Q99NC0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.3■□□□□ 0.84
Vgll1Q99NC0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.29■□□□□ 0.84
Vgll1Q99NC0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vgll1Q99NC0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vgll1Q99NC0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Vgll1Q99NC0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vgll1Q99NC0 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vgll1Q99NC0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.27■□□□□ 0.84
Vgll1Q99NC0 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.27■□□□□ 0.84
Vgll1Q99NC0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vgll1Q99NC0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Vgll1Q99NC0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vgll1Q99NC0 Gm24970-201ENSMUST00000175582 82 ntBASIC20.26■□□□□ 0.83
Vgll1Q99NC0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.26■□□□□ 0.83
Vgll1Q99NC0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Vgll1Q99NC0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.25■□□□□ 0.83
Vgll1Q99NC0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.25■□□□□ 0.83
Vgll1Q99NC0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Vgll1Q99NC0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Vgll1Q99NC0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vgll1Q99NC0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vgll1Q99NC0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vgll1Q99NC0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vgll1Q99NC0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vgll1Q99NC0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vgll1Q99NC0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Vgll1Q99NC0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vgll1Q99NC0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vgll1Q99NC0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vgll1Q99NC0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vgll1Q99NC0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Vgll1Q99NC0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vgll1Q99NC0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vgll1Q99NC0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vgll1Q99NC0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vgll1Q99NC0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vgll1Q99NC0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.2■□□□□ 0.82
Vgll1Q99NC0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Vgll1Q99NC0 Gm45855-201ENSMUST00000212546 880 ntBASIC20.19■□□□□ 0.82
Vgll1Q99NC0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.19■□□□□ 0.82
Vgll1Q99NC0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vgll1Q99NC0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vgll1Q99NC0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.17■□□□□ 0.82
Vgll1Q99NC0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vgll1Q99NC0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vgll1Q99NC0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Vgll1Q99NC0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vgll1Q99NC0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Vgll1Q99NC0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vgll1Q99NC0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vgll1Q99NC0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vgll1Q99NC0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vgll1Q99NC0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vgll1Q99NC0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Vgll1Q99NC0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vgll1Q99NC0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vgll1Q99NC0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vgll1Q99NC0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Vgll1Q99NC0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vgll1Q99NC0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Vgll1Q99NC0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vgll1Q99NC0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.1■□□□□ 0.81
Vgll1Q99NC0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Vgll1Q99NC0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.09■□□□□ 0.81
Vgll1Q99NC0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
Vgll1Q99NC0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Vgll1Q99NC0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vgll1Q99NC0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Vgll1Q99NC0 Gm30023-201ENSMUST00000197970 889 ntBASIC20.07■□□□□ 0.8
Vgll1Q99NC0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vgll1Q99NC0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vgll1Q99NC0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Vgll1Q99NC0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms