Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Rpap2Q8VC34 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
Rpap2Q8VC34 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Rpap2Q8VC34 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Rpap2Q8VC34 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC26.43■■□□□ 1.82
Rpap2Q8VC34 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Rpap2Q8VC34 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC26.42■■□□□ 1.82
Rpap2Q8VC34 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Rpap2Q8VC34 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
Rpap2Q8VC34 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
Rpap2Q8VC34 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Rpap2Q8VC34 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Rpap2Q8VC34 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Rpap2Q8VC34 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Rpap2Q8VC34 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Rpap2Q8VC34 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Rpap2Q8VC34 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Rpap2Q8VC34 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rpap2Q8VC34 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
Rpap2Q8VC34 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rpap2Q8VC34 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC26.37■■□□□ 1.81
Rpap2Q8VC34 Gm30023-201ENSMUST00000197970 889 ntBASIC26.37■■□□□ 1.81
Rpap2Q8VC34 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rpap2Q8VC34 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rpap2Q8VC34 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rpap2Q8VC34 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rpap2Q8VC34 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rpap2Q8VC34 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
Rpap2Q8VC34 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.35■■□□□ 1.81
Rpap2Q8VC34 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rpap2Q8VC34 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rpap2Q8VC34 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC26.35■■□□□ 1.81
Rpap2Q8VC34 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Rpap2Q8VC34 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rpap2Q8VC34 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Rpap2Q8VC34 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rpap2Q8VC34 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rpap2Q8VC34 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rpap2Q8VC34 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC26.31■■□□□ 1.8
Rpap2Q8VC34 Gm42809-201ENSMUST00000198429 1138 ntBASIC26.31■■□□□ 1.8
Rpap2Q8VC34 Nkain2-201ENSMUST00000092602 558 ntBASIC26.31■■□□□ 1.8
Rpap2Q8VC34 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
Rpap2Q8VC34 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rpap2Q8VC34 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.29■■□□□ 1.8
Rpap2Q8VC34 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC26.29■■□□□ 1.8
Rpap2Q8VC34 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Rpap2Q8VC34 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
Rpap2Q8VC34 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Rpap2Q8VC34 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rpap2Q8VC34 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rpap2Q8VC34 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Rpap2Q8VC34 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Rpap2Q8VC34 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rpap2Q8VC34 Gm9939-201ENSMUST00000067161 1154 ntBASIC26.26■■□□□ 1.79
Rpap2Q8VC34 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC26.25■■□□□ 1.79
Rpap2Q8VC34 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rpap2Q8VC34 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Rpap2Q8VC34 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC26.25■■□□□ 1.79
Rpap2Q8VC34 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Rpap2Q8VC34 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rpap2Q8VC34 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Rpap2Q8VC34 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Rpap2Q8VC34 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rpap2Q8VC34 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
Rpap2Q8VC34 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rpap2Q8VC34 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC26.22■■□□□ 1.79
Rpap2Q8VC34 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
Rpap2Q8VC34 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
Rpap2Q8VC34 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Rpap2Q8VC34 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Rpap2Q8VC34 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Rpap2Q8VC34 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC26.19■■□□□ 1.78
Rpap2Q8VC34 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Rpap2Q8VC34 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC26.18■■□□□ 1.78
Rpap2Q8VC34 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Rpap2Q8VC34 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Rpap2Q8VC34 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC26.17■■□□□ 1.78
Rpap2Q8VC34 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Rpap2Q8VC34 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Rpap2Q8VC34 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
Rpap2Q8VC34 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC26.15■■□□□ 1.78
Rpap2Q8VC34 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Rpap2Q8VC34 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Rpap2Q8VC34 Gm6821-201ENSMUST00000107540 542 ntBASIC26.12■■□□□ 1.77
Rpap2Q8VC34 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
Rpap2Q8VC34 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Rpap2Q8VC34 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rpap2Q8VC34 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Rpap2Q8VC34 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC26.1■■□□□ 1.77
Rpap2Q8VC34 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Rpap2Q8VC34 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Rpap2Q8VC34 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC26.08■■□□□ 1.77
Rpap2Q8VC34 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Rpap2Q8VC34 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC26.07■■□□□ 1.76
Rpap2Q8VC34 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Rpap2Q8VC34 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC26.07■■□□□ 1.76
Rpap2Q8VC34 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rpap2Q8VC34 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rpap2Q8VC34 Gm8503-201ENSMUST00000118131 455 ntBASIC26.06■■□□□ 1.76
Rpap2Q8VC34 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26.06■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms