Protein–RNA interactions for Protein: Q8R3H9

Ttc4, Tetratricopeptide repeat protein 4, mousemouse

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc4Q8R3H9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ttc4Q8R3H9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ttc4Q8R3H9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ttc4Q8R3H9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ttc4Q8R3H9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC22.02■■□□□ 1.12
Ttc4Q8R3H9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.11
Ttc4Q8R3H9 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ttc4Q8R3H9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Ttc4Q8R3H9 AC166822.3-201ENSMUST00000227394 661 ntBASIC22.01■■□□□ 1.11
Ttc4Q8R3H9 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ttc4Q8R3H9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ttc4Q8R3H9 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Ttc4Q8R3H9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ttc4Q8R3H9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ttc4Q8R3H9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ttc4Q8R3H9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Ttc4Q8R3H9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.99■■□□□ 1.11
Ttc4Q8R3H9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ttc4Q8R3H9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ttc4Q8R3H9 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ttc4Q8R3H9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ttc4Q8R3H9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Ttc4Q8R3H9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Ttc4Q8R3H9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ttc4Q8R3H9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ttc4Q8R3H9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
Ttc4Q8R3H9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
Ttc4Q8R3H9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Ttc4Q8R3H9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ttc4Q8R3H9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Ttc4Q8R3H9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.94■■□□□ 1.1
Ttc4Q8R3H9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.93■■□□□ 1.1
Ttc4Q8R3H9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ttc4Q8R3H9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ttc4Q8R3H9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ttc4Q8R3H9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ttc4Q8R3H9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ttc4Q8R3H9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ttc4Q8R3H9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Ttc4Q8R3H9 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ttc4Q8R3H9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ttc4Q8R3H9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Ttc4Q8R3H9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ttc4Q8R3H9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Ttc4Q8R3H9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Ttc4Q8R3H9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Ttc4Q8R3H9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Ttc4Q8R3H9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Ttc4Q8R3H9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Ttc4Q8R3H9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ttc4Q8R3H9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ttc4Q8R3H9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
Ttc4Q8R3H9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ttc4Q8R3H9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ttc4Q8R3H9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ttc4Q8R3H9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Ttc4Q8R3H9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ttc4Q8R3H9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.87■■□□□ 1.09
Ttc4Q8R3H9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ttc4Q8R3H9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ttc4Q8R3H9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Ttc4Q8R3H9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ttc4Q8R3H9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ttc4Q8R3H9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ttc4Q8R3H9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ttc4Q8R3H9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.85■■□□□ 1.09
Ttc4Q8R3H9 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Ttc4Q8R3H9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ttc4Q8R3H9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.84■■□□□ 1.09
Ttc4Q8R3H9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ttc4Q8R3H9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ttc4Q8R3H9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ttc4Q8R3H9 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.83■■□□□ 1.09
Ttc4Q8R3H9 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ttc4Q8R3H9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ttc4Q8R3H9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ttc4Q8R3H9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
Ttc4Q8R3H9 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Ttc4Q8R3H9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ttc4Q8R3H9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ttc4Q8R3H9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ttc4Q8R3H9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ttc4Q8R3H9 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ttc4Q8R3H9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ttc4Q8R3H9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ttc4Q8R3H9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ttc4Q8R3H9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ttc4Q8R3H9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ttc4Q8R3H9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ttc4Q8R3H9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ttc4Q8R3H9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ttc4Q8R3H9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ttc4Q8R3H9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ttc4Q8R3H9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ttc4Q8R3H9 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ttc4Q8R3H9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
Ttc4Q8R3H9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ttc4Q8R3H9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ttc4Q8R3H9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ttc4Q8R3H9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms