Protein–RNA interactions for Protein: Q8R272

Vmn1r220, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r220Q8R272 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vmn1r220Q8R272 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Vmn1r220Q8R272 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vmn1r220Q8R272 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.56■■□□□ 1.04
Vmn1r220Q8R272 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.56■■□□□ 1.04
Vmn1r220Q8R272 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vmn1r220Q8R272 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vmn1r220Q8R272 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.55■■□□□ 1.04
Vmn1r220Q8R272 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
Vmn1r220Q8R272 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.55■■□□□ 1.04
Vmn1r220Q8R272 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vmn1r220Q8R272 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vmn1r220Q8R272 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.53■■□□□ 1.04
Vmn1r220Q8R272 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Vmn1r220Q8R272 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vmn1r220Q8R272 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vmn1r220Q8R272 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Vmn1r220Q8R272 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.51■■□□□ 1.03
Vmn1r220Q8R272 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.51■■□□□ 1.03
Vmn1r220Q8R272 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vmn1r220Q8R272 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Vmn1r220Q8R272 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vmn1r220Q8R272 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Vmn1r220Q8R272 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vmn1r220Q8R272 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.49■■□□□ 1.03
Vmn1r220Q8R272 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.49■■□□□ 1.03
Vmn1r220Q8R272 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vmn1r220Q8R272 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vmn1r220Q8R272 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
Vmn1r220Q8R272 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Vmn1r220Q8R272 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Vmn1r220Q8R272 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.03
Vmn1r220Q8R272 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Vmn1r220Q8R272 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Vmn1r220Q8R272 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vmn1r220Q8R272 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.43■■□□□ 1.02
Vmn1r220Q8R272 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Vmn1r220Q8R272 Gm30023-201ENSMUST00000197970 889 ntBASIC21.42■■□□□ 1.02
Vmn1r220Q8R272 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.41■■□□□ 1.02
Vmn1r220Q8R272 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.41■■□□□ 1.02
Vmn1r220Q8R272 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vmn1r220Q8R272 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Vmn1r220Q8R272 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Vmn1r220Q8R272 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Vmn1r220Q8R272 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Vmn1r220Q8R272 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Vmn1r220Q8R272 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Vmn1r220Q8R272 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Vmn1r220Q8R272 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Vmn1r220Q8R272 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vmn1r220Q8R272 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vmn1r220Q8R272 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.36■■□□□ 1.01
Vmn1r220Q8R272 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Vmn1r220Q8R272 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Vmn1r220Q8R272 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vmn1r220Q8R272 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Vmn1r220Q8R272 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.35■■□□□ 1.01
Vmn1r220Q8R272 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.35■■□□□ 1.01
Vmn1r220Q8R272 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.35■■□□□ 1.01
Vmn1r220Q8R272 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.34■■□□□ 1.01
Vmn1r220Q8R272 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Vmn1r220Q8R272 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
Vmn1r220Q8R272 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.34■■□□□ 1.01
Vmn1r220Q8R272 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Vmn1r220Q8R272 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.33■■□□□ 1.01
Vmn1r220Q8R272 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Vmn1r220Q8R272 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.32■■□□□ 1
Vmn1r220Q8R272 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vmn1r220Q8R272 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vmn1r220Q8R272 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vmn1r220Q8R272 Gm7432-201ENSMUST00000210343 879 ntBASIC21.31■■□□□ 1
Vmn1r220Q8R272 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Vmn1r220Q8R272 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Vmn1r220Q8R272 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.31■■□□□ 1
Vmn1r220Q8R272 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vmn1r220Q8R272 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.29■■□□□ 1
Vmn1r220Q8R272 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Vmn1r220Q8R272 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.29■■□□□ 1
Vmn1r220Q8R272 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.29■■□□□ 1
Vmn1r220Q8R272 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.28■■□□□ 1
Vmn1r220Q8R272 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vmn1r220Q8R272 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Vmn1r220Q8R272 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vmn1r220Q8R272 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.26■□□□□ 0.99
Vmn1r220Q8R272 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vmn1r220Q8R272 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Vmn1r220Q8R272 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Vmn1r220Q8R272 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.25■□□□□ 0.99
Vmn1r220Q8R272 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vmn1r220Q8R272 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Vmn1r220Q8R272 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.24■□□□□ 0.99
Vmn1r220Q8R272 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Vmn1r220Q8R272 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.23■□□□□ 0.99
Vmn1r220Q8R272 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Vmn1r220Q8R272 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.23■□□□□ 0.99
Vmn1r220Q8R272 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vmn1r220Q8R272 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vmn1r220Q8R272 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
Vmn1r220Q8R272 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.21■□□□□ 0.99
Vmn1r220Q8R272 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms