Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Ddx54Q8K4L0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
Ddx54Q8K4L0 Gm4799-201ENSMUST00000095396 657 ntBASIC32.61■■■□□ 2.81
Ddx54Q8K4L0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Ddx54Q8K4L0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC32.6■■■□□ 2.81
Ddx54Q8K4L0 Particl-201ENSMUST00000205370 1560 ntBASIC32.59■■■□□ 2.81
Ddx54Q8K4L0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC32.59■■■□□ 2.81
Ddx54Q8K4L0 Gm9806-201ENSMUST00000051080 552 ntBASIC32.59■■■□□ 2.81
Ddx54Q8K4L0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
Ddx54Q8K4L0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Ddx54Q8K4L0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
Ddx54Q8K4L0 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Ddx54Q8K4L0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
Ddx54Q8K4L0 Gm16437-201ENSMUST00000025669 507 ntBASIC32.55■■■□□ 2.8
Ddx54Q8K4L0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Ddx54Q8K4L0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
Ddx54Q8K4L0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
Ddx54Q8K4L0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
Ddx54Q8K4L0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC32.5■■■□□ 2.79
Ddx54Q8K4L0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC32.5■■■□□ 2.79
Ddx54Q8K4L0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Ddx54Q8K4L0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC32.5■■■□□ 2.79
Ddx54Q8K4L0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC32.49■■■□□ 2.79
Ddx54Q8K4L0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC32.48■■■□□ 2.79
Ddx54Q8K4L0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC32.48■■■□□ 2.79
Ddx54Q8K4L0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
Ddx54Q8K4L0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC32.47■■■□□ 2.79
Ddx54Q8K4L0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Ddx54Q8K4L0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Ddx54Q8K4L0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
Ddx54Q8K4L0 Gm7332-201ENSMUST00000118351 454 ntBASIC32.44■■■□□ 2.78
Ddx54Q8K4L0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Ddx54Q8K4L0 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC32.43■■■□□ 2.78
Ddx54Q8K4L0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Ddx54Q8K4L0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC32.42■■■□□ 2.78
Ddx54Q8K4L0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC32.41■■■□□ 2.78
Ddx54Q8K4L0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Ddx54Q8K4L0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Ddx54Q8K4L0 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC32.4■■■□□ 2.78
Ddx54Q8K4L0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Ddx54Q8K4L0 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC32.39■■■□□ 2.78
Ddx54Q8K4L0 Gm27502-201ENSMUST00000183495 199 ntBASIC32.38■■■□□ 2.77
Ddx54Q8K4L0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Ddx54Q8K4L0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
Ddx54Q8K4L0 Gm30023-201ENSMUST00000197970 889 ntBASIC32.36■■■□□ 2.77
Ddx54Q8K4L0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Ddx54Q8K4L0 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Ddx54Q8K4L0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Ddx54Q8K4L0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Ddx54Q8K4L0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Ddx54Q8K4L0 Gm2415-204ENSMUST00000190235 2004 ntBASIC32.33■■■□□ 2.77
Ddx54Q8K4L0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Ddx54Q8K4L0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC32.32■■■□□ 2.76
Ddx54Q8K4L0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
Ddx54Q8K4L0 Pkd1-207ENSMUST00000228550 1050 ntBASIC32.32■■■□□ 2.76
Ddx54Q8K4L0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Ddx54Q8K4L0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Ddx54Q8K4L0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC32.31■■■□□ 2.76
Ddx54Q8K4L0 Gm22567-201ENSMUST00000175542 342 ntBASIC32.3■■■□□ 2.76
Ddx54Q8K4L0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Ddx54Q8K4L0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC32.29■■■□□ 2.76
Ddx54Q8K4L0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Ddx54Q8K4L0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC32.27■■■□□ 2.76
Ddx54Q8K4L0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Ddx54Q8K4L0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
Ddx54Q8K4L0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Ddx54Q8K4L0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Ddx54Q8K4L0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC32.24■■■□□ 2.75
Ddx54Q8K4L0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC32.24■■■□□ 2.75
Ddx54Q8K4L0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Ddx54Q8K4L0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC32.23■■■□□ 2.75
Ddx54Q8K4L0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Ddx54Q8K4L0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Ddx54Q8K4L0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC32.22■■■□□ 2.75
Ddx54Q8K4L0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC32.22■■■□□ 2.75
Ddx54Q8K4L0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Ddx54Q8K4L0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
Ddx54Q8K4L0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Ddx54Q8K4L0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Ddx54Q8K4L0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC32.15■■■□□ 2.74
Ddx54Q8K4L0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
Ddx54Q8K4L0 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Ddx54Q8K4L0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC32.13■■■□□ 2.73
Ddx54Q8K4L0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Ddx54Q8K4L0 AC154454.1-201ENSMUST00000225253 216 ntBASIC32.12■■■□□ 2.73
Ddx54Q8K4L0 Mir3960-201ENSMUST00000198213 73 ntBASIC32.11■■■□□ 2.73
Ddx54Q8K4L0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Ddx54Q8K4L0 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Ddx54Q8K4L0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC32.11■■■□□ 2.73
Ddx54Q8K4L0 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Ddx54Q8K4L0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Ddx54Q8K4L0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC32.09■■■□□ 2.73
Ddx54Q8K4L0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC32.09■■■□□ 2.73
Ddx54Q8K4L0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC32.08■■■□□ 2.73
Ddx54Q8K4L0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC32.07■■■□□ 2.73
Ddx54Q8K4L0 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
Ddx54Q8K4L0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC32.06■■■□□ 2.72
Ddx54Q8K4L0 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
Ddx54Q8K4L0 Gm6658-202ENSMUST00000209493 1885 ntBASIC32.06■■■□□ 2.72
Ddx54Q8K4L0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms