Protein–RNA interactions for Protein: Q8K158

Cnppd1, Protein CNPPD1, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnppd1Q8K158 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cnppd1Q8K158 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cnppd1Q8K158 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.45■■□□□ 1.02
Cnppd1Q8K158 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Cnppd1Q8K158 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.45■■□□□ 1.02
Cnppd1Q8K158 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.44■■□□□ 1.02
Cnppd1Q8K158 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cnppd1Q8K158 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cnppd1Q8K158 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cnppd1Q8K158 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cnppd1Q8K158 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.42■■□□□ 1.02
Cnppd1Q8K158 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cnppd1Q8K158 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cnppd1Q8K158 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cnppd1Q8K158 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cnppd1Q8K158 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cnppd1Q8K158 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Cnppd1Q8K158 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cnppd1Q8K158 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cnppd1Q8K158 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cnppd1Q8K158 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Cnppd1Q8K158 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.39■■□□□ 1.01
Cnppd1Q8K158 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cnppd1Q8K158 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cnppd1Q8K158 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.38■■□□□ 1.01
Cnppd1Q8K158 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cnppd1Q8K158 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cnppd1Q8K158 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.37■■□□□ 1.01
Cnppd1Q8K158 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cnppd1Q8K158 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cnppd1Q8K158 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Cnppd1Q8K158 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cnppd1Q8K158 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cnppd1Q8K158 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cnppd1Q8K158 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cnppd1Q8K158 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cnppd1Q8K158 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Cnppd1Q8K158 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cnppd1Q8K158 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Cnppd1Q8K158 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cnppd1Q8K158 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Cnppd1Q8K158 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.33■■□□□ 1
Cnppd1Q8K158 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cnppd1Q8K158 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cnppd1Q8K158 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.32■■□□□ 1
Cnppd1Q8K158 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cnppd1Q8K158 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cnppd1Q8K158 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cnppd1Q8K158 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cnppd1Q8K158 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cnppd1Q8K158 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cnppd1Q8K158 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cnppd1Q8K158 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Cnppd1Q8K158 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cnppd1Q8K158 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cnppd1Q8K158 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Cnppd1Q8K158 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cnppd1Q8K158 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.29■■□□□ 1
Cnppd1Q8K158 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cnppd1Q8K158 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Cnppd1Q8K158 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Cnppd1Q8K158 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.28■■□□□ 1
Cnppd1Q8K158 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.28■■□□□ 1
Cnppd1Q8K158 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.28■■□□□ 1
Cnppd1Q8K158 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cnppd1Q8K158 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.27■■□□□ 1
Cnppd1Q8K158 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Cnppd1Q8K158 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cnppd1Q8K158 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cnppd1Q8K158 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cnppd1Q8K158 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Cnppd1Q8K158 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cnppd1Q8K158 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cnppd1Q8K158 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cnppd1Q8K158 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cnppd1Q8K158 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Cnppd1Q8K158 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cnppd1Q8K158 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cnppd1Q8K158 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Cnppd1Q8K158 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cnppd1Q8K158 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.21■□□□□ 0.99
Cnppd1Q8K158 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cnppd1Q8K158 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cnppd1Q8K158 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cnppd1Q8K158 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cnppd1Q8K158 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cnppd1Q8K158 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cnppd1Q8K158 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.19■□□□□ 0.98
Cnppd1Q8K158 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Cnppd1Q8K158 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cnppd1Q8K158 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cnppd1Q8K158 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Cnppd1Q8K158 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cnppd1Q8K158 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cnppd1Q8K158 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cnppd1Q8K158 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cnppd1Q8K158 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cnppd1Q8K158 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cnppd1Q8K158 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cnppd1Q8K158 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms