Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
Zc3h3Q8CHP0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC24.37■■□□□ 1.49
Zc3h3Q8CHP0 Gm16437-201ENSMUST00000025669 507 ntBASIC24.37■■□□□ 1.49
Zc3h3Q8CHP0 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Zc3h3Q8CHP0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Zc3h3Q8CHP0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Zc3h3Q8CHP0 Particl-201ENSMUST00000205370 1560 ntBASIC24.36■■□□□ 1.49
Zc3h3Q8CHP0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Zc3h3Q8CHP0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Zc3h3Q8CHP0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Zc3h3Q8CHP0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Zc3h3Q8CHP0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Zc3h3Q8CHP0 Gm7332-201ENSMUST00000118351 454 ntBASIC24.34■■□□□ 1.49
Zc3h3Q8CHP0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Zc3h3Q8CHP0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Zc3h3Q8CHP0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Zc3h3Q8CHP0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Zc3h3Q8CHP0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Zc3h3Q8CHP0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Zc3h3Q8CHP0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Zc3h3Q8CHP0 Gm22567-201ENSMUST00000175542 342 ntBASIC24.3■■□□□ 1.48
Zc3h3Q8CHP0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Zc3h3Q8CHP0 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC24.27■■□□□ 1.48
Zc3h3Q8CHP0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Zc3h3Q8CHP0 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC24.26■■□□□ 1.47
Zc3h3Q8CHP0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.26■■□□□ 1.47
Zc3h3Q8CHP0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Zc3h3Q8CHP0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
Zc3h3Q8CHP0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Zc3h3Q8CHP0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Zc3h3Q8CHP0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Zc3h3Q8CHP0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Zc3h3Q8CHP0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Zc3h3Q8CHP0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Zc3h3Q8CHP0 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Zc3h3Q8CHP0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
Zc3h3Q8CHP0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Zc3h3Q8CHP0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Zc3h3Q8CHP0 Gm27502-201ENSMUST00000183495 199 ntBASIC24.21■■□□□ 1.47
Zc3h3Q8CHP0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC24.2■■□□□ 1.46
Zc3h3Q8CHP0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.2■■□□□ 1.46
Zc3h3Q8CHP0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
Zc3h3Q8CHP0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
Zc3h3Q8CHP0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC24.19■■□□□ 1.46
Zc3h3Q8CHP0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Zc3h3Q8CHP0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Zc3h3Q8CHP0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Zc3h3Q8CHP0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC24.18■■□□□ 1.46
Zc3h3Q8CHP0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.18■■□□□ 1.46
Zc3h3Q8CHP0 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.18■■□□□ 1.46
Zc3h3Q8CHP0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Zc3h3Q8CHP0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.18■■□□□ 1.46
Zc3h3Q8CHP0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.17■■□□□ 1.46
Zc3h3Q8CHP0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Zc3h3Q8CHP0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Zc3h3Q8CHP0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC24.16■■□□□ 1.46
Zc3h3Q8CHP0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Zc3h3Q8CHP0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Zc3h3Q8CHP0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Zc3h3Q8CHP0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
Zc3h3Q8CHP0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Zc3h3Q8CHP0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Zc3h3Q8CHP0 Gm30023-201ENSMUST00000197970 889 ntBASIC24.12■■□□□ 1.45
Zc3h3Q8CHP0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Zc3h3Q8CHP0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Zc3h3Q8CHP0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC24.11■■□□□ 1.45
Zc3h3Q8CHP0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC24.11■■□□□ 1.45
Zc3h3Q8CHP0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
Zc3h3Q8CHP0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Zc3h3Q8CHP0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Zc3h3Q8CHP0 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Zc3h3Q8CHP0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Zc3h3Q8CHP0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Zc3h3Q8CHP0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Zc3h3Q8CHP0 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Zc3h3Q8CHP0 Gm5812-201ENSMUST00000061073 957 ntBASIC24.07■■□□□ 1.44
Zc3h3Q8CHP0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Zc3h3Q8CHP0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Zc3h3Q8CHP0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
Zc3h3Q8CHP0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Zc3h3Q8CHP0 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Zc3h3Q8CHP0 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Zc3h3Q8CHP0 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.03■■□□□ 1.44
Zc3h3Q8CHP0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Zc3h3Q8CHP0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.02■■□□□ 1.44
Zc3h3Q8CHP0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Zc3h3Q8CHP0 Mir3960-201ENSMUST00000198213 73 ntBASIC24.01■■□□□ 1.43
Zc3h3Q8CHP0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Zc3h3Q8CHP0 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Zc3h3Q8CHP0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24■■□□□ 1.43
Zc3h3Q8CHP0 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Zc3h3Q8CHP0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Zc3h3Q8CHP0 Gm14523-201ENSMUST00000117260 558 ntBASIC23.97■■□□□ 1.43
Zc3h3Q8CHP0 Gm5067-201ENSMUST00000170449 1009 ntBASIC23.97■■□□□ 1.43
Zc3h3Q8CHP0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Zc3h3Q8CHP0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Zc3h3Q8CHP0 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Zc3h3Q8CHP0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Zc3h3Q8CHP0 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Zc3h3Q8CHP0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms