Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC39.53■■■■□ 3.92
Pabpn1Q8CCS6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC39.53■■■■□ 3.92
Pabpn1Q8CCS6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC39.52■■■■□ 3.92
Pabpn1Q8CCS6 Gm27502-201ENSMUST00000183495 199 ntBASIC39.52■■■■□ 3.92
Pabpn1Q8CCS6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC39.5■■■■□ 3.91
Pabpn1Q8CCS6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC39.5■■■■□ 3.91
Pabpn1Q8CCS6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC39.47■■■■□ 3.91
Pabpn1Q8CCS6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC39.45■■■■□ 3.91
Pabpn1Q8CCS6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC39.44■■■■□ 3.9
Pabpn1Q8CCS6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC39.44■■■■□ 3.9
Pabpn1Q8CCS6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC39.43■■■■□ 3.9
Pabpn1Q8CCS6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC39.4■■■■□ 3.9
Pabpn1Q8CCS6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC39.4■■■■□ 3.9
Pabpn1Q8CCS6 Particl-201ENSMUST00000205370 1560 ntBASIC39.4■■■■□ 3.9
Pabpn1Q8CCS6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC39.39■■■■□ 3.9
Pabpn1Q8CCS6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC39.37■■■■□ 3.89
Pabpn1Q8CCS6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC39.37■■■■□ 3.89
Pabpn1Q8CCS6 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC39.37■■■■□ 3.89
Pabpn1Q8CCS6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC39.36■■■■□ 3.89
Pabpn1Q8CCS6 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC39.36■■■■□ 3.89
Pabpn1Q8CCS6 Gm15546-201ENSMUST00000122095 826 ntBASIC39.34■■■■□ 3.89
Pabpn1Q8CCS6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC39.32■■■■□ 3.88
Pabpn1Q8CCS6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC39.31■■■■□ 3.88
Pabpn1Q8CCS6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC39.31■■■■□ 3.88
Pabpn1Q8CCS6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC39.3■■■■□ 3.88
Pabpn1Q8CCS6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC39.3■■■■□ 3.88
Pabpn1Q8CCS6 Gm30346-201ENSMUST00000218641 1699 ntBASIC39.29■■■■□ 3.88
Pabpn1Q8CCS6 Pkd1-207ENSMUST00000228550 1050 ntBASIC39.27■■■■□ 3.88
Pabpn1Q8CCS6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC39.27■■■■□ 3.88
Pabpn1Q8CCS6 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC39.26■■■■□ 3.88
Pabpn1Q8CCS6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC39.26■■■■□ 3.88
Pabpn1Q8CCS6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC39.25■■■■□ 3.87
Pabpn1Q8CCS6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC39.25■■■■□ 3.87
Pabpn1Q8CCS6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC39.25■■■■□ 3.87
Pabpn1Q8CCS6 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC39.24■■■■□ 3.87
Pabpn1Q8CCS6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC39.23■■■■□ 3.87
Pabpn1Q8CCS6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC39.23■■■■□ 3.87
Pabpn1Q8CCS6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC39.23■■■■□ 3.87
Pabpn1Q8CCS6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC39.23■■■■□ 3.87
Pabpn1Q8CCS6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC39.22■■■■□ 3.87
Pabpn1Q8CCS6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC39.21■■■■□ 3.87
Pabpn1Q8CCS6 Gm14523-201ENSMUST00000117260 558 ntBASIC39.21■■■■□ 3.87
Pabpn1Q8CCS6 Gm5067-201ENSMUST00000170449 1009 ntBASIC39.21■■■■□ 3.87
Pabpn1Q8CCS6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC39.21■■■■□ 3.87
Pabpn1Q8CCS6 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC39.2■■■■□ 3.87
Pabpn1Q8CCS6 Gm5921-201ENSMUST00000075898 882 ntBASIC39.19■■■■□ 3.86
Pabpn1Q8CCS6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC39.18■■■■□ 3.86
Pabpn1Q8CCS6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC39.17■■■■□ 3.86
Pabpn1Q8CCS6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC39.13■■■■□ 3.85
Pabpn1Q8CCS6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC39.12■■■■□ 3.85
Pabpn1Q8CCS6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC39.11■■■■□ 3.85
Pabpn1Q8CCS6 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
Pabpn1Q8CCS6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
Pabpn1Q8CCS6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
Pabpn1Q8CCS6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
Pabpn1Q8CCS6 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC39.08■■■■□ 3.85
Pabpn1Q8CCS6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC39.07■■■■□ 3.85
Pabpn1Q8CCS6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC39.07■■■■□ 3.85
Pabpn1Q8CCS6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC39.07■■■■□ 3.84
Pabpn1Q8CCS6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC39.06■■■■□ 3.84
Pabpn1Q8CCS6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC39.06■■■■□ 3.84
Pabpn1Q8CCS6 AC154454.1-201ENSMUST00000225253 216 ntBASIC39.05■■■■□ 3.84
Pabpn1Q8CCS6 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC39.04■■■■□ 3.84
Pabpn1Q8CCS6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC39.04■■■■□ 3.84
Pabpn1Q8CCS6 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC39.03■■■■□ 3.84
Pabpn1Q8CCS6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC39.03■■■■□ 3.84
Pabpn1Q8CCS6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC39.03■■■■□ 3.84
Pabpn1Q8CCS6 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC39.02■■■■□ 3.84
Pabpn1Q8CCS6 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC39.01■■■■□ 3.84
Pabpn1Q8CCS6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC39■■■■□ 3.83
Pabpn1Q8CCS6 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC39■■■■□ 3.83
Pabpn1Q8CCS6 Gm5522-201ENSMUST00000189483 1242 ntBASIC39■■■■□ 3.83
Pabpn1Q8CCS6 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC38.99■■■■□ 3.83
Pabpn1Q8CCS6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC38.99■■■■□ 3.83
Pabpn1Q8CCS6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC38.98■■■■□ 3.83
Pabpn1Q8CCS6 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC38.97■■■■□ 3.83
Pabpn1Q8CCS6 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC38.96■■■■□ 3.83
Pabpn1Q8CCS6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC38.95■■■■□ 3.83
Pabpn1Q8CCS6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC38.95■■■■□ 3.83
Pabpn1Q8CCS6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC38.95■■■■□ 3.83
Pabpn1Q8CCS6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC38.94■■■■□ 3.82
Pabpn1Q8CCS6 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC38.93■■■■□ 3.82
Pabpn1Q8CCS6 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
Pabpn1Q8CCS6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC38.92■■■■□ 3.82
Pabpn1Q8CCS6 Mir3960-201ENSMUST00000198213 73 ntBASIC38.91■■■■□ 3.82
Pabpn1Q8CCS6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC38.9■■■■□ 3.82
Pabpn1Q8CCS6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC38.9■■■■□ 3.82
Pabpn1Q8CCS6 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC38.9■■■■□ 3.82
Pabpn1Q8CCS6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC38.9■■■■□ 3.82
Pabpn1Q8CCS6 AC093043.1-201ENSMUST00000226700 898 ntBASIC38.9■■■■□ 3.82
Pabpn1Q8CCS6 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC38.9■■■■□ 3.82
Pabpn1Q8CCS6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC38.89■■■■□ 3.82
Pabpn1Q8CCS6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC38.89■■■■□ 3.82
Pabpn1Q8CCS6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC38.88■■■■□ 3.81
Pabpn1Q8CCS6 Gm45364-201ENSMUST00000210883 159 ntBASIC38.87■■■■□ 3.81
Pabpn1Q8CCS6 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC38.87■■■■□ 3.81
Pabpn1Q8CCS6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC38.85■■■■□ 3.81
Pabpn1Q8CCS6 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC38.85■■■■□ 3.81
Pabpn1Q8CCS6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC38.85■■■■□ 3.81
Pabpn1Q8CCS6 Gm10420-201ENSMUST00000121713 882 ntBASIC38.84■■■■□ 3.81
Retrieved 100 of 76,532 protein–RNA pairs in 7.6 ms