Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Trim9Q8C7M3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Trim9Q8C7M3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Trim9Q8C7M3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC26.59■■□□□ 1.85
Trim9Q8C7M3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC26.58■■□□□ 1.84
Trim9Q8C7M3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC26.58■■□□□ 1.84
Trim9Q8C7M3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Trim9Q8C7M3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
Trim9Q8C7M3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Trim9Q8C7M3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Trim9Q8C7M3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Trim9Q8C7M3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Trim9Q8C7M3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Trim9Q8C7M3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
Trim9Q8C7M3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Trim9Q8C7M3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
Trim9Q8C7M3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Trim9Q8C7M3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
Trim9Q8C7M3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC26.52■■□□□ 1.84
Trim9Q8C7M3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
Trim9Q8C7M3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Trim9Q8C7M3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Trim9Q8C7M3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Trim9Q8C7M3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Trim9Q8C7M3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Trim9Q8C7M3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
Trim9Q8C7M3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Trim9Q8C7M3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Trim9Q8C7M3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Trim9Q8C7M3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Trim9Q8C7M3 Gm30023-201ENSMUST00000197970 889 ntBASIC26.46■■□□□ 1.83
Trim9Q8C7M3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Trim9Q8C7M3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Trim9Q8C7M3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC26.45■■□□□ 1.82
Trim9Q8C7M3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
Trim9Q8C7M3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Trim9Q8C7M3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Trim9Q8C7M3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Trim9Q8C7M3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Trim9Q8C7M3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Trim9Q8C7M3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Trim9Q8C7M3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
Trim9Q8C7M3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
Trim9Q8C7M3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trim9Q8C7M3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC26.43■■□□□ 1.82
Trim9Q8C7M3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
Trim9Q8C7M3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
Trim9Q8C7M3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Trim9Q8C7M3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC26.42■■□□□ 1.82
Trim9Q8C7M3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC26.42■■□□□ 1.82
Trim9Q8C7M3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC26.42■■□□□ 1.82
Trim9Q8C7M3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
Trim9Q8C7M3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Trim9Q8C7M3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Trim9Q8C7M3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Trim9Q8C7M3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
Trim9Q8C7M3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Trim9Q8C7M3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC26.39■■□□□ 1.82
Trim9Q8C7M3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
Trim9Q8C7M3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Trim9Q8C7M3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Trim9Q8C7M3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Trim9Q8C7M3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
Trim9Q8C7M3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Trim9Q8C7M3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC26.37■■□□□ 1.81
Trim9Q8C7M3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
Trim9Q8C7M3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Trim9Q8C7M3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Trim9Q8C7M3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC26.36■■□□□ 1.81
Trim9Q8C7M3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Trim9Q8C7M3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Trim9Q8C7M3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.36■■□□□ 1.81
Trim9Q8C7M3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Trim9Q8C7M3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Trim9Q8C7M3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Trim9Q8C7M3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC26.34■■□□□ 1.81
Trim9Q8C7M3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Trim9Q8C7M3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.33■■□□□ 1.81
Trim9Q8C7M3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
Trim9Q8C7M3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trim9Q8C7M3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trim9Q8C7M3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.32■■□□□ 1.8
Trim9Q8C7M3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Trim9Q8C7M3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trim9Q8C7M3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Trim9Q8C7M3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Trim9Q8C7M3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Trim9Q8C7M3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Trim9Q8C7M3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Trim9Q8C7M3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Trim9Q8C7M3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC26.29■■□□□ 1.8
Trim9Q8C7M3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Trim9Q8C7M3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC26.29■■□□□ 1.8
Trim9Q8C7M3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC26.28■■□□□ 1.8
Trim9Q8C7M3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Trim9Q8C7M3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Trim9Q8C7M3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
Trim9Q8C7M3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Trim9Q8C7M3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Trim9Q8C7M3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC26.25■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms