Protein–RNA interactions for Protein: Q8C4D8

Gm11541, Predicted gene 11541, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11541Q8C4D8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm11541Q8C4D8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.41■■□□□ 1.02
Gm11541Q8C4D8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Gm11541Q8C4D8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm11541Q8C4D8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm11541Q8C4D8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.4■■□□□ 1.02
Gm11541Q8C4D8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm11541Q8C4D8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm11541Q8C4D8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm11541Q8C4D8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm11541Q8C4D8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm11541Q8C4D8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Gm11541Q8C4D8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm11541Q8C4D8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm11541Q8C4D8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm11541Q8C4D8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Gm11541Q8C4D8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm11541Q8C4D8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm11541Q8C4D8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm11541Q8C4D8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Gm11541Q8C4D8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.35■■□□□ 1.01
Gm11541Q8C4D8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Gm11541Q8C4D8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm11541Q8C4D8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm11541Q8C4D8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm11541Q8C4D8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Gm11541Q8C4D8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm11541Q8C4D8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Gm11541Q8C4D8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm11541Q8C4D8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Gm11541Q8C4D8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm11541Q8C4D8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm11541Q8C4D8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm11541Q8C4D8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.31■■□□□ 1
Gm11541Q8C4D8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Gm11541Q8C4D8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Gm11541Q8C4D8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm11541Q8C4D8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm11541Q8C4D8 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gm11541Q8C4D8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.28■■□□□ 1
Gm11541Q8C4D8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.28■■□□□ 1
Gm11541Q8C4D8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Gm11541Q8C4D8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm11541Q8C4D8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm11541Q8C4D8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.28■■□□□ 1
Gm11541Q8C4D8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm11541Q8C4D8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm11541Q8C4D8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm11541Q8C4D8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm11541Q8C4D8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.27■■□□□ 1
Gm11541Q8C4D8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
Gm11541Q8C4D8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Gm11541Q8C4D8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.26■□□□□ 0.99
Gm11541Q8C4D8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm11541Q8C4D8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm11541Q8C4D8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Gm11541Q8C4D8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm11541Q8C4D8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm11541Q8C4D8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Gm11541Q8C4D8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gm11541Q8C4D8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gm11541Q8C4D8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Gm11541Q8C4D8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm11541Q8C4D8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Gm11541Q8C4D8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
Gm11541Q8C4D8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm11541Q8C4D8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Gm11541Q8C4D8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm11541Q8C4D8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm11541Q8C4D8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Gm11541Q8C4D8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Gm11541Q8C4D8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm11541Q8C4D8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.19■□□□□ 0.98
Gm11541Q8C4D8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm11541Q8C4D8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm11541Q8C4D8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Gm11541Q8C4D8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.17■□□□□ 0.98
Gm11541Q8C4D8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm11541Q8C4D8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm11541Q8C4D8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm11541Q8C4D8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm11541Q8C4D8 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm11541Q8C4D8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm11541Q8C4D8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm11541Q8C4D8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Gm11541Q8C4D8 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.14■□□□□ 0.97
Gm11541Q8C4D8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm11541Q8C4D8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Gm11541Q8C4D8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm11541Q8C4D8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm11541Q8C4D8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm11541Q8C4D8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Gm11541Q8C4D8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm11541Q8C4D8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Gm11541Q8C4D8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
Gm11541Q8C4D8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm11541Q8C4D8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm11541Q8C4D8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm11541Q8C4D8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm11541Q8C4D8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms