Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Gm30023-201ENSMUST00000197970 889 ntBASIC25.45■■□□□ 1.66
Brat1Q8C3R1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Brat1Q8C3R1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.45■■□□□ 1.66
Brat1Q8C3R1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Brat1Q8C3R1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Brat1Q8C3R1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25.44■■□□□ 1.66
Brat1Q8C3R1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Brat1Q8C3R1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
Brat1Q8C3R1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Brat1Q8C3R1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Brat1Q8C3R1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Brat1Q8C3R1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
Brat1Q8C3R1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Brat1Q8C3R1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Brat1Q8C3R1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Brat1Q8C3R1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC25.39■■□□□ 1.66
Brat1Q8C3R1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Brat1Q8C3R1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.38■■□□□ 1.65
Brat1Q8C3R1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Brat1Q8C3R1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Brat1Q8C3R1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.37■■□□□ 1.65
Brat1Q8C3R1 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25.37■■□□□ 1.65
Brat1Q8C3R1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Brat1Q8C3R1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Brat1Q8C3R1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Brat1Q8C3R1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC25.36■■□□□ 1.65
Brat1Q8C3R1 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Brat1Q8C3R1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Brat1Q8C3R1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Brat1Q8C3R1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
Brat1Q8C3R1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Brat1Q8C3R1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.35■■□□□ 1.65
Brat1Q8C3R1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.35■■□□□ 1.65
Brat1Q8C3R1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Brat1Q8C3R1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Brat1Q8C3R1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Brat1Q8C3R1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.33■■□□□ 1.65
Brat1Q8C3R1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Brat1Q8C3R1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Brat1Q8C3R1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
Brat1Q8C3R1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Brat1Q8C3R1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Brat1Q8C3R1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.3■■□□□ 1.64
Brat1Q8C3R1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Brat1Q8C3R1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Brat1Q8C3R1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
Brat1Q8C3R1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Brat1Q8C3R1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.27■■□□□ 1.64
Brat1Q8C3R1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.27■■□□□ 1.64
Brat1Q8C3R1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Brat1Q8C3R1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Brat1Q8C3R1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Brat1Q8C3R1 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
Brat1Q8C3R1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
Brat1Q8C3R1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
Brat1Q8C3R1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Brat1Q8C3R1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Brat1Q8C3R1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Brat1Q8C3R1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Brat1Q8C3R1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Brat1Q8C3R1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
Brat1Q8C3R1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Brat1Q8C3R1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Brat1Q8C3R1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.21■■□□□ 1.63
Brat1Q8C3R1 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Brat1Q8C3R1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Brat1Q8C3R1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Brat1Q8C3R1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
Brat1Q8C3R1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Brat1Q8C3R1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Brat1Q8C3R1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Brat1Q8C3R1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
Brat1Q8C3R1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Brat1Q8C3R1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Brat1Q8C3R1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
Brat1Q8C3R1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Brat1Q8C3R1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Brat1Q8C3R1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25.16■■□□□ 1.62
Brat1Q8C3R1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Brat1Q8C3R1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Brat1Q8C3R1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Brat1Q8C3R1 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Brat1Q8C3R1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC25.15■■□□□ 1.62
Brat1Q8C3R1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC25.14■■□□□ 1.62
Brat1Q8C3R1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC25.13■■□□□ 1.61
Brat1Q8C3R1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Brat1Q8C3R1 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.12■■□□□ 1.61
Brat1Q8C3R1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Brat1Q8C3R1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Brat1Q8C3R1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
Brat1Q8C3R1 Gm7432-201ENSMUST00000210343 879 ntBASIC25.1■■□□□ 1.61
Brat1Q8C3R1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25.1■■□□□ 1.61
Brat1Q8C3R1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Brat1Q8C3R1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC25.08■■□□□ 1.61
Brat1Q8C3R1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Brat1Q8C3R1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC25.07■■□□□ 1.6
Brat1Q8C3R1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.07■■□□□ 1.6
Brat1Q8C3R1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC25.06■■□□□ 1.6
Brat1Q8C3R1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Brat1Q8C3R1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC25.06■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms