Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd9Q8BYH8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.53■□□□□ 0.72
Chd9Q8BYH8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Chd9Q8BYH8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chd9Q8BYH8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.52■□□□□ 0.72
Chd9Q8BYH8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Chd9Q8BYH8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.51■□□□□ 0.71
Chd9Q8BYH8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chd9Q8BYH8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Chd9Q8BYH8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Chd9Q8BYH8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd9Q8BYH8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.5■□□□□ 0.71
Chd9Q8BYH8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
Chd9Q8BYH8 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.49■□□□□ 0.71
Chd9Q8BYH8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Chd9Q8BYH8 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd9Q8BYH8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd9Q8BYH8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.48■□□□□ 0.71
Chd9Q8BYH8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Chd9Q8BYH8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chd9Q8BYH8 Gm15820-201ENSMUST00000201566 728 ntBASIC19.47■□□□□ 0.71
Chd9Q8BYH8 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.47■□□□□ 0.71
Chd9Q8BYH8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Chd9Q8BYH8 Gm11687-201ENSMUST00000118911 886 ntBASIC19.46■□□□□ 0.71
Chd9Q8BYH8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.46■□□□□ 0.71
Chd9Q8BYH8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.46■□□□□ 0.71
Chd9Q8BYH8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.46■□□□□ 0.71
Chd9Q8BYH8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Chd9Q8BYH8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chd9Q8BYH8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chd9Q8BYH8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chd9Q8BYH8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Chd9Q8BYH8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chd9Q8BYH8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.43■□□□□ 0.7
Chd9Q8BYH8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chd9Q8BYH8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.42■□□□□ 0.7
Chd9Q8BYH8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.42■□□□□ 0.7
Chd9Q8BYH8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd9Q8BYH8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.42■□□□□ 0.7
Chd9Q8BYH8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Chd9Q8BYH8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chd9Q8BYH8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chd9Q8BYH8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd9Q8BYH8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chd9Q8BYH8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Chd9Q8BYH8 Gm16437-201ENSMUST00000025669 507 ntBASIC19.4■□□□□ 0.7
Chd9Q8BYH8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chd9Q8BYH8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd9Q8BYH8 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.39■□□□□ 0.7
Chd9Q8BYH8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Chd9Q8BYH8 Gm9806-201ENSMUST00000051080 552 ntBASIC19.39■□□□□ 0.7
Chd9Q8BYH8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Chd9Q8BYH8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chd9Q8BYH8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Chd9Q8BYH8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.38■□□□□ 0.69
Chd9Q8BYH8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Chd9Q8BYH8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chd9Q8BYH8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chd9Q8BYH8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chd9Q8BYH8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chd9Q8BYH8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chd9Q8BYH8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chd9Q8BYH8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.34■□□□□ 0.69
Chd9Q8BYH8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chd9Q8BYH8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Chd9Q8BYH8 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chd9Q8BYH8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Chd9Q8BYH8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.33■□□□□ 0.68
Chd9Q8BYH8 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chd9Q8BYH8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.31■□□□□ 0.68
Chd9Q8BYH8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chd9Q8BYH8 Gm5921-201ENSMUST00000075898 882 ntBASIC19.31■□□□□ 0.68
Chd9Q8BYH8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chd9Q8BYH8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Chd9Q8BYH8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd9Q8BYH8 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.29■□□□□ 0.68
Chd9Q8BYH8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Chd9Q8BYH8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd9Q8BYH8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd9Q8BYH8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd9Q8BYH8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.27■□□□□ 0.68
Chd9Q8BYH8 Rps24-207ENSMUST00000224568 714 ntBASIC19.27■□□□□ 0.68
Chd9Q8BYH8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chd9Q8BYH8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chd9Q8BYH8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Chd9Q8BYH8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chd9Q8BYH8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chd9Q8BYH8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd9Q8BYH8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Chd9Q8BYH8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chd9Q8BYH8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Chd9Q8BYH8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chd9Q8BYH8 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.24■□□□□ 0.67
Chd9Q8BYH8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chd9Q8BYH8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.24■□□□□ 0.67
Chd9Q8BYH8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd9Q8BYH8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.23■□□□□ 0.67
Chd9Q8BYH8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd9Q8BYH8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.22■□□□□ 0.67
Chd9Q8BYH8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms