Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC34.64■■■■□ 3.14
Usp47Q8BY87 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
Usp47Q8BY87 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC34.62■■■■□ 3.13
Usp47Q8BY87 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC34.62■■■■□ 3.13
Usp47Q8BY87 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
Usp47Q8BY87 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC34.61■■■■□ 3.13
Usp47Q8BY87 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC34.6■■■■□ 3.13
Usp47Q8BY87 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
Usp47Q8BY87 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
Usp47Q8BY87 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC34.59■■■■□ 3.13
Usp47Q8BY87 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC34.58■■■■□ 3.13
Usp47Q8BY87 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
Usp47Q8BY87 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
Usp47Q8BY87 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
Usp47Q8BY87 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
Usp47Q8BY87 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
Usp47Q8BY87 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
Usp47Q8BY87 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
Usp47Q8BY87 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC34.54■■■■□ 3.12
Usp47Q8BY87 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC34.52■■■■□ 3.12
Usp47Q8BY87 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC34.52■■■■□ 3.12
Usp47Q8BY87 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
Usp47Q8BY87 Amer2-203ENSMUST00000225247 2662 ntBASIC34.52■■■■□ 3.12
Usp47Q8BY87 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC34.52■■■■□ 3.12
Usp47Q8BY87 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC34.52■■■■□ 3.12
Usp47Q8BY87 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
Usp47Q8BY87 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC34.5■■■■□ 3.11
Usp47Q8BY87 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC34.5■■■■□ 3.11
Usp47Q8BY87 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC34.49■■■■□ 3.11
Usp47Q8BY87 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
Usp47Q8BY87 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
Usp47Q8BY87 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC34.49■■■■□ 3.11
Usp47Q8BY87 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC34.49■■■■□ 3.11
Usp47Q8BY87 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC34.48■■■■□ 3.11
Usp47Q8BY87 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC34.47■■■■□ 3.11
Usp47Q8BY87 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC34.46■■■■□ 3.11
Usp47Q8BY87 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC34.44■■■■□ 3.1
Usp47Q8BY87 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Usp47Q8BY87 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC34.43■■■■□ 3.1
Usp47Q8BY87 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
Usp47Q8BY87 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC34.43■■■■□ 3.1
Usp47Q8BY87 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
Usp47Q8BY87 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC34.4■■■■□ 3.1
Usp47Q8BY87 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Usp47Q8BY87 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC34.38■■■■□ 3.09
Usp47Q8BY87 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC34.38■■■■□ 3.09
Usp47Q8BY87 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC34.38■■■■□ 3.09
Usp47Q8BY87 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC34.38■■■■□ 3.09
Usp47Q8BY87 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Usp47Q8BY87 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
Usp47Q8BY87 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
Usp47Q8BY87 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
Usp47Q8BY87 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
Usp47Q8BY87 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC34.36■■■■□ 3.09
Usp47Q8BY87 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC34.35■■■■□ 3.09
Usp47Q8BY87 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Usp47Q8BY87 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
Usp47Q8BY87 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
Usp47Q8BY87 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
Usp47Q8BY87 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
Usp47Q8BY87 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC34.31■■■■□ 3.08
Usp47Q8BY87 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC34.3■■■■□ 3.08
Usp47Q8BY87 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC34.3■■■■□ 3.08
Usp47Q8BY87 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC34.29■■■■□ 3.08
Usp47Q8BY87 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
Usp47Q8BY87 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
Usp47Q8BY87 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC34.28■■■■□ 3.08
Usp47Q8BY87 Gm7432-201ENSMUST00000210343 879 ntBASIC34.28■■■■□ 3.08
Usp47Q8BY87 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
Usp47Q8BY87 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
Usp47Q8BY87 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Usp47Q8BY87 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Usp47Q8BY87 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC34.24■■■■□ 3.07
Usp47Q8BY87 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
Usp47Q8BY87 Gm5987-201ENSMUST00000196433 1151 ntBASIC34.23■■■■□ 3.07
Usp47Q8BY87 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
Usp47Q8BY87 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
Usp47Q8BY87 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
Usp47Q8BY87 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
Usp47Q8BY87 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC34.21■■■■□ 3.07
Usp47Q8BY87 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC34.2■■■■□ 3.07
Usp47Q8BY87 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC34.2■■■■□ 3.07
Usp47Q8BY87 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC34.19■■■■□ 3.06
Usp47Q8BY87 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC34.17■■■■□ 3.06
Usp47Q8BY87 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
Usp47Q8BY87 Gm11599-201ENSMUST00000118720 878 ntBASIC34.16■■■■□ 3.06
Usp47Q8BY87 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC34.16■■■■□ 3.06
Usp47Q8BY87 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC34.16■■■■□ 3.06
Usp47Q8BY87 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
Usp47Q8BY87 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC34.15■■■■□ 3.06
Usp47Q8BY87 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC34.14■■■■□ 3.06
Usp47Q8BY87 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC34.14■■■■□ 3.06
Usp47Q8BY87 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC34.13■■■■□ 3.05
Usp47Q8BY87 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC34.13■■■■□ 3.05
Usp47Q8BY87 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC34.12■■■■□ 3.05
Usp47Q8BY87 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC34.11■■■■□ 3.05
Usp47Q8BY87 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC34.11■■■■□ 3.05
Usp47Q8BY87 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC34.1■■■■□ 3.05
Usp47Q8BY87 Particl-201ENSMUST00000205370 1560 ntBASIC34.09■■■■□ 3.05
Usp47Q8BY87 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC34.07■■■■□ 3.04
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms