Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smco3Q8BQM7 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smco3Q8BQM7 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smco3Q8BQM7 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.71
Smco3Q8BQM7 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smco3Q8BQM7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smco3Q8BQM7 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smco3Q8BQM7 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Smco3Q8BQM7 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.51■□□□□ 0.71
Smco3Q8BQM7 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smco3Q8BQM7 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smco3Q8BQM7 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smco3Q8BQM7 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smco3Q8BQM7 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smco3Q8BQM7 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smco3Q8BQM7 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smco3Q8BQM7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Smco3Q8BQM7 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smco3Q8BQM7 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smco3Q8BQM7 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smco3Q8BQM7 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smco3Q8BQM7 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Smco3Q8BQM7 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smco3Q8BQM7 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.48■□□□□ 0.71
Smco3Q8BQM7 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smco3Q8BQM7 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Smco3Q8BQM7 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smco3Q8BQM7 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smco3Q8BQM7 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smco3Q8BQM7 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smco3Q8BQM7 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smco3Q8BQM7 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Smco3Q8BQM7 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smco3Q8BQM7 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smco3Q8BQM7 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Smco3Q8BQM7 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Smco3Q8BQM7 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.43■□□□□ 0.7
Smco3Q8BQM7 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smco3Q8BQM7 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smco3Q8BQM7 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Smco3Q8BQM7 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smco3Q8BQM7 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Smco3Q8BQM7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smco3Q8BQM7 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smco3Q8BQM7 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Smco3Q8BQM7 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Smco3Q8BQM7 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.4■□□□□ 0.7
Smco3Q8BQM7 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smco3Q8BQM7 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smco3Q8BQM7 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smco3Q8BQM7 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smco3Q8BQM7 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smco3Q8BQM7 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Smco3Q8BQM7 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smco3Q8BQM7 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smco3Q8BQM7 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Smco3Q8BQM7 Peli2-204ENSMUST00000226513 1320 ntBASIC19.37■□□□□ 0.69
Smco3Q8BQM7 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Smco3Q8BQM7 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smco3Q8BQM7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Smco3Q8BQM7 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Smco3Q8BQM7 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smco3Q8BQM7 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.33■□□□□ 0.69
Smco3Q8BQM7 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smco3Q8BQM7 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Smco3Q8BQM7 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.32■□□□□ 0.68
Smco3Q8BQM7 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.32■□□□□ 0.68
Smco3Q8BQM7 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smco3Q8BQM7 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smco3Q8BQM7 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smco3Q8BQM7 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.31■□□□□ 0.68
Smco3Q8BQM7 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smco3Q8BQM7 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smco3Q8BQM7 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Smco3Q8BQM7 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smco3Q8BQM7 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smco3Q8BQM7 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smco3Q8BQM7 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smco3Q8BQM7 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smco3Q8BQM7 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smco3Q8BQM7 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Smco3Q8BQM7 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Smco3Q8BQM7 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smco3Q8BQM7 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smco3Q8BQM7 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smco3Q8BQM7 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.28■□□□□ 0.68
Smco3Q8BQM7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smco3Q8BQM7 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Smco3Q8BQM7 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smco3Q8BQM7 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smco3Q8BQM7 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smco3Q8BQM7 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smco3Q8BQM7 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smco3Q8BQM7 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Smco3Q8BQM7 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smco3Q8BQM7 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Smco3Q8BQM7 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smco3Q8BQM7 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smco3Q8BQM7 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smco3Q8BQM7 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms