Protein–RNA interactions for Protein: Q8BLA8

Trpa1, Transient receptor potential cation channel subfamily A member 1, mousemouse

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1Q8BLA8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
Trpa1Q8BLA8 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC25.04■■□□□ 1.6
Trpa1Q8BLA8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Trpa1Q8BLA8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Trpa1Q8BLA8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Trpa1Q8BLA8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
Trpa1Q8BLA8 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.01■■□□□ 1.59
Trpa1Q8BLA8 Amer2-203ENSMUST00000225247 2662 ntBASIC25.01■■□□□ 1.59
Trpa1Q8BLA8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC25■■□□□ 1.59
Trpa1Q8BLA8 Gm6821-201ENSMUST00000107540 542 ntBASIC25■■□□□ 1.59
Trpa1Q8BLA8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25■■□□□ 1.59
Trpa1Q8BLA8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25■■□□□ 1.59
Trpa1Q8BLA8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC25■■□□□ 1.59
Trpa1Q8BLA8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
Trpa1Q8BLA8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Trpa1Q8BLA8 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Trpa1Q8BLA8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Trpa1Q8BLA8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Trpa1Q8BLA8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Trpa1Q8BLA8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Trpa1Q8BLA8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Trpa1Q8BLA8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.96■■□□□ 1.59
Trpa1Q8BLA8 Nkain2-201ENSMUST00000092602 558 ntBASIC24.95■■□□□ 1.58
Trpa1Q8BLA8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
Trpa1Q8BLA8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
Trpa1Q8BLA8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.94■■□□□ 1.58
Trpa1Q8BLA8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
Trpa1Q8BLA8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Trpa1Q8BLA8 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.92■■□□□ 1.58
Trpa1Q8BLA8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
Trpa1Q8BLA8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
Trpa1Q8BLA8 Gm8503-201ENSMUST00000118131 455 ntBASIC24.91■■□□□ 1.58
Trpa1Q8BLA8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Trpa1Q8BLA8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Trpa1Q8BLA8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Trpa1Q8BLA8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Trpa1Q8BLA8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.89■■□□□ 1.58
Trpa1Q8BLA8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Trpa1Q8BLA8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Trpa1Q8BLA8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Trpa1Q8BLA8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.88■■□□□ 1.57
Trpa1Q8BLA8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Trpa1Q8BLA8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.87■■□□□ 1.57
Trpa1Q8BLA8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.87■■□□□ 1.57
Trpa1Q8BLA8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
Trpa1Q8BLA8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.86■■□□□ 1.57
Trpa1Q8BLA8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Trpa1Q8BLA8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Trpa1Q8BLA8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
Trpa1Q8BLA8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.83■■□□□ 1.57
Trpa1Q8BLA8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Trpa1Q8BLA8 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Trpa1Q8BLA8 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Trpa1Q8BLA8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.82■■□□□ 1.56
Trpa1Q8BLA8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Trpa1Q8BLA8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Trpa1Q8BLA8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Trpa1Q8BLA8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
Trpa1Q8BLA8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
Trpa1Q8BLA8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.8■■□□□ 1.56
Trpa1Q8BLA8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Trpa1Q8BLA8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.79■■□□□ 1.56
Trpa1Q8BLA8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Trpa1Q8BLA8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Trpa1Q8BLA8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.79■■□□□ 1.56
Trpa1Q8BLA8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Trpa1Q8BLA8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trpa1Q8BLA8 Gm30023-201ENSMUST00000197970 889 ntBASIC24.78■■□□□ 1.56
Trpa1Q8BLA8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trpa1Q8BLA8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trpa1Q8BLA8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.77■■□□□ 1.56
Trpa1Q8BLA8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Trpa1Q8BLA8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Trpa1Q8BLA8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.75■■□□□ 1.55
Trpa1Q8BLA8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.74■■□□□ 1.55
Trpa1Q8BLA8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.73■■□□□ 1.55
Trpa1Q8BLA8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Trpa1Q8BLA8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
Trpa1Q8BLA8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Trpa1Q8BLA8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Trpa1Q8BLA8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
Trpa1Q8BLA8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC24.71■■□□□ 1.55
Trpa1Q8BLA8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC24.71■■□□□ 1.55
Trpa1Q8BLA8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Trpa1Q8BLA8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Trpa1Q8BLA8 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.71■■□□□ 1.55
Trpa1Q8BLA8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Trpa1Q8BLA8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
Trpa1Q8BLA8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Trpa1Q8BLA8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Trpa1Q8BLA8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Trpa1Q8BLA8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Trpa1Q8BLA8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.69■■□□□ 1.54
Trpa1Q8BLA8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Trpa1Q8BLA8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Trpa1Q8BLA8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Trpa1Q8BLA8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Trpa1Q8BLA8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.67■■□□□ 1.54
Trpa1Q8BLA8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Trpa1Q8BLA8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.66■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms