Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Smg1Q8BKX6 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.94■□□□□ 0.94
Smg1Q8BKX6 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.94■□□□□ 0.94
Smg1Q8BKX6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Smg1Q8BKX6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smg1Q8BKX6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Smg1Q8BKX6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smg1Q8BKX6 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Smg1Q8BKX6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smg1Q8BKX6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smg1Q8BKX6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Smg1Q8BKX6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smg1Q8BKX6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smg1Q8BKX6 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smg1Q8BKX6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.89■□□□□ 0.93
Smg1Q8BKX6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Smg1Q8BKX6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.87■□□□□ 0.93
Smg1Q8BKX6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smg1Q8BKX6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smg1Q8BKX6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.86■□□□□ 0.93
Smg1Q8BKX6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smg1Q8BKX6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.85■□□□□ 0.93
Smg1Q8BKX6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smg1Q8BKX6 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.84■□□□□ 0.93
Smg1Q8BKX6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smg1Q8BKX6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Smg1Q8BKX6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smg1Q8BKX6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smg1Q8BKX6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.83■□□□□ 0.93
Smg1Q8BKX6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.83■□□□□ 0.92
Smg1Q8BKX6 Scarna2-201ENSMUST00000157560 414 ntBASIC20.83■□□□□ 0.92
Smg1Q8BKX6 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smg1Q8BKX6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smg1Q8BKX6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.82■□□□□ 0.92
Smg1Q8BKX6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smg1Q8BKX6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.81■□□□□ 0.92
Smg1Q8BKX6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smg1Q8BKX6 Gm9806-201ENSMUST00000051080 552 ntBASIC20.81■□□□□ 0.92
Smg1Q8BKX6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smg1Q8BKX6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smg1Q8BKX6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smg1Q8BKX6 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.8■□□□□ 0.92
Smg1Q8BKX6 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Smg1Q8BKX6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Smg1Q8BKX6 Gm7332-201ENSMUST00000118351 454 ntBASIC20.79■□□□□ 0.92
Smg1Q8BKX6 Gm11687-201ENSMUST00000118911 886 ntBASIC20.79■□□□□ 0.92
Smg1Q8BKX6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smg1Q8BKX6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Smg1Q8BKX6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.76■□□□□ 0.91
Smg1Q8BKX6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smg1Q8BKX6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Smg1Q8BKX6 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smg1Q8BKX6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Smg1Q8BKX6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smg1Q8BKX6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smg1Q8BKX6 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.75■□□□□ 0.91
Smg1Q8BKX6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smg1Q8BKX6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smg1Q8BKX6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.74■□□□□ 0.91
Smg1Q8BKX6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smg1Q8BKX6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smg1Q8BKX6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.72■□□□□ 0.91
Smg1Q8BKX6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.72■□□□□ 0.91
Smg1Q8BKX6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smg1Q8BKX6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smg1Q8BKX6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smg1Q8BKX6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smg1Q8BKX6 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smg1Q8BKX6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Smg1Q8BKX6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Smg1Q8BKX6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.69■□□□□ 0.9
Smg1Q8BKX6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.68■□□□□ 0.9
Smg1Q8BKX6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Smg1Q8BKX6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.68■□□□□ 0.9
Smg1Q8BKX6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smg1Q8BKX6 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.67■□□□□ 0.9
Smg1Q8BKX6 Gm16437-201ENSMUST00000025669 507 ntBASIC20.66■□□□□ 0.9
Smg1Q8BKX6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smg1Q8BKX6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smg1Q8BKX6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smg1Q8BKX6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smg1Q8BKX6 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smg1Q8BKX6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smg1Q8BKX6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
Smg1Q8BKX6 Gm14523-201ENSMUST00000117260 558 ntBASIC20.65■□□□□ 0.9
Smg1Q8BKX6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.65■□□□□ 0.9
Smg1Q8BKX6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smg1Q8BKX6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smg1Q8BKX6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smg1Q8BKX6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Smg1Q8BKX6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smg1Q8BKX6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smg1Q8BKX6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smg1Q8BKX6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.62■□□□□ 0.89
Smg1Q8BKX6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smg1Q8BKX6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smg1Q8BKX6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smg1Q8BKX6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Smg1Q8BKX6 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.61■□□□□ 0.89
Smg1Q8BKX6 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms