Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.05■■□□□ 1.28
Otop1Q80VM9 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Otop1Q80VM9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC23.04■■□□□ 1.28
Otop1Q80VM9 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Otop1Q80VM9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Otop1Q80VM9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Otop1Q80VM9 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
Otop1Q80VM9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Otop1Q80VM9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Otop1Q80VM9 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.02■■□□□ 1.28
Otop1Q80VM9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Otop1Q80VM9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Otop1Q80VM9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Otop1Q80VM9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23■■□□□ 1.27
Otop1Q80VM9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
Otop1Q80VM9 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Otop1Q80VM9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC23■■□□□ 1.27
Otop1Q80VM9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Otop1Q80VM9 Particl-201ENSMUST00000205370 1560 ntBASIC22.98■■□□□ 1.27
Otop1Q80VM9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Otop1Q80VM9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Otop1Q80VM9 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
Otop1Q80VM9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Otop1Q80VM9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Otop1Q80VM9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Otop1Q80VM9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Otop1Q80VM9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Otop1Q80VM9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Otop1Q80VM9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Otop1Q80VM9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Otop1Q80VM9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Otop1Q80VM9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Otop1Q80VM9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Otop1Q80VM9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.26
Otop1Q80VM9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Otop1Q80VM9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Otop1Q80VM9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Otop1Q80VM9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Otop1Q80VM9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Otop1Q80VM9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Otop1Q80VM9 Gm30023-201ENSMUST00000197970 889 ntBASIC22.9■■□□□ 1.26
Otop1Q80VM9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Otop1Q80VM9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Otop1Q80VM9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
Otop1Q80VM9 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
Otop1Q80VM9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Otop1Q80VM9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Otop1Q80VM9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Otop1Q80VM9 Scarna2-201ENSMUST00000157560 414 ntBASIC22.87■■□□□ 1.25
Otop1Q80VM9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Otop1Q80VM9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Otop1Q80VM9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Otop1Q80VM9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Otop1Q80VM9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Otop1Q80VM9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Otop1Q80VM9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.84■■□□□ 1.25
Otop1Q80VM9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Otop1Q80VM9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.84■■□□□ 1.25
Otop1Q80VM9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Otop1Q80VM9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Otop1Q80VM9 Gm11687-201ENSMUST00000118911 886 ntBASIC22.82■■□□□ 1.24
Otop1Q80VM9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Otop1Q80VM9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Otop1Q80VM9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Otop1Q80VM9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Otop1Q80VM9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.81■■□□□ 1.24
Otop1Q80VM9 Gm12366-201ENSMUST00000121722 873 ntBASIC22.81■■□□□ 1.24
Otop1Q80VM9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.81■■□□□ 1.24
Otop1Q80VM9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.81■■□□□ 1.24
Otop1Q80VM9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Otop1Q80VM9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.81■■□□□ 1.24
Otop1Q80VM9 Gm5786-201ENSMUST00000085368 882 ntBASIC22.81■■□□□ 1.24
Otop1Q80VM9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Otop1Q80VM9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Otop1Q80VM9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Otop1Q80VM9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC22.8■■□□□ 1.24
Otop1Q80VM9 Gm9806-201ENSMUST00000051080 552 ntBASIC22.8■■□□□ 1.24
Otop1Q80VM9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Otop1Q80VM9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Otop1Q80VM9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Otop1Q80VM9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Otop1Q80VM9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Otop1Q80VM9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Otop1Q80VM9 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Otop1Q80VM9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Otop1Q80VM9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.76■■□□□ 1.23
Otop1Q80VM9 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Otop1Q80VM9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.76■■□□□ 1.23
Otop1Q80VM9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Otop1Q80VM9 Gm4799-201ENSMUST00000095396 657 ntBASIC22.76■■□□□ 1.23
Otop1Q80VM9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Otop1Q80VM9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Otop1Q80VM9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Otop1Q80VM9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Otop1Q80VM9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.75■■□□□ 1.23
Otop1Q80VM9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.75■■□□□ 1.23
Otop1Q80VM9 Gm16437-201ENSMUST00000025669 507 ntBASIC22.75■■□□□ 1.23
Otop1Q80VM9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Otop1Q80VM9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Otop1Q80VM9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms