Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Sned1Q70E20 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC30.46■■■□□ 2.47
Sned1Q70E20 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Sned1Q70E20 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Sned1Q70E20 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
Sned1Q70E20 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
Sned1Q70E20 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC30.43■■■□□ 2.46
Sned1Q70E20 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Sned1Q70E20 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Sned1Q70E20 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Sned1Q70E20 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Sned1Q70E20 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC30.39■■■□□ 2.46
Sned1Q70E20 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Sned1Q70E20 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Sned1Q70E20 Scarna2-201ENSMUST00000157560 414 ntBASIC30.39■■■□□ 2.45
Sned1Q70E20 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
Sned1Q70E20 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
Sned1Q70E20 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Sned1Q70E20 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Sned1Q70E20 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC30.38■■■□□ 2.45
Sned1Q70E20 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC30.38■■■□□ 2.45
Sned1Q70E20 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC30.36■■■□□ 2.45
Sned1Q70E20 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
Sned1Q70E20 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Sned1Q70E20 Gm30023-201ENSMUST00000197970 889 ntBASIC30.35■■■□□ 2.45
Sned1Q70E20 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Sned1Q70E20 Gm4799-201ENSMUST00000095396 657 ntBASIC30.34■■■□□ 2.45
Sned1Q70E20 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Sned1Q70E20 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
Sned1Q70E20 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC30.32■■■□□ 2.44
Sned1Q70E20 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Sned1Q70E20 Gm9806-201ENSMUST00000051080 552 ntBASIC30.31■■■□□ 2.44
Sned1Q70E20 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC30.3■■■□□ 2.44
Sned1Q70E20 Gm11687-201ENSMUST00000118911 886 ntBASIC30.3■■■□□ 2.44
Sned1Q70E20 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Sned1Q70E20 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Sned1Q70E20 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC30.29■■■□□ 2.44
Sned1Q70E20 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC30.29■■■□□ 2.44
Sned1Q70E20 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Sned1Q70E20 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Sned1Q70E20 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Sned1Q70E20 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Sned1Q70E20 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Sned1Q70E20 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC30.24■■■□□ 2.43
Sned1Q70E20 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Sned1Q70E20 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Sned1Q70E20 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Sned1Q70E20 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Sned1Q70E20 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Sned1Q70E20 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.22■■■□□ 2.43
Sned1Q70E20 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Sned1Q70E20 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Sned1Q70E20 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC30.21■■■□□ 2.43
Sned1Q70E20 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Sned1Q70E20 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC30.2■■■□□ 2.42
Sned1Q70E20 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Sned1Q70E20 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Sned1Q70E20 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Sned1Q70E20 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Sned1Q70E20 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC30.17■■■□□ 2.42
Sned1Q70E20 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC30.16■■■□□ 2.42
Sned1Q70E20 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC30.16■■■□□ 2.42
Sned1Q70E20 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
Sned1Q70E20 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC30.16■■■□□ 2.42
Sned1Q70E20 Gm16437-201ENSMUST00000025669 507 ntBASIC30.15■■■□□ 2.42
Sned1Q70E20 Pkd1-207ENSMUST00000228550 1050 ntBASIC30.13■■■□□ 2.41
Sned1Q70E20 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Sned1Q70E20 Gm27502-201ENSMUST00000183495 199 ntBASIC30.13■■■□□ 2.41
Sned1Q70E20 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Sned1Q70E20 Gm15039-201ENSMUST00000118914 875 ntBASIC30.12■■■□□ 2.41
Sned1Q70E20 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Sned1Q70E20 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Sned1Q70E20 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
Sned1Q70E20 AC154454.1-201ENSMUST00000225253 216 ntBASIC30.09■■■□□ 2.41
Sned1Q70E20 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
Sned1Q70E20 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Sned1Q70E20 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Sned1Q70E20 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC30.07■■■□□ 2.4
Sned1Q70E20 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.4
Sned1Q70E20 Gm7332-201ENSMUST00000118351 454 ntBASIC30.06■■■□□ 2.4
Sned1Q70E20 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Sned1Q70E20 Gm45364-201ENSMUST00000210883 159 ntBASIC30.05■■■□□ 2.4
Sned1Q70E20 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Sned1Q70E20 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Sned1Q70E20 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC30.02■■■□□ 2.4
Sned1Q70E20 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Sned1Q70E20 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Sned1Q70E20 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC30.01■■■□□ 2.4
Sned1Q70E20 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Sned1Q70E20 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Sned1Q70E20 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.39
Sned1Q70E20 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC29.99■■■□□ 2.39
Sned1Q70E20 Pcf11-205ENSMUST00000208255 1720 ntBASIC29.98■■■□□ 2.39
Sned1Q70E20 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Sned1Q70E20 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
Sned1Q70E20 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Sned1Q70E20 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Sned1Q70E20 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Sned1Q70E20 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC29.96■■■□□ 2.39
Sned1Q70E20 Mir3960-201ENSMUST00000198213 73 ntBASIC29.95■■■□□ 2.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms