Protein–RNA interactions for Protein: Q6PDJ1

Cachd1, VWFA and cache domain-containing protein 1, mousemouse

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cachd1Q6PDJ1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Cachd1Q6PDJ1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Cachd1Q6PDJ1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.61■■□□□ 1.53
Cachd1Q6PDJ1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC24.61■■□□□ 1.53
Cachd1Q6PDJ1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Cachd1Q6PDJ1 Rps24-207ENSMUST00000224568 714 ntBASIC24.59■■□□□ 1.53
Cachd1Q6PDJ1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cachd1Q6PDJ1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Cachd1Q6PDJ1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cachd1Q6PDJ1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Cachd1Q6PDJ1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Cachd1Q6PDJ1 Gm5921-201ENSMUST00000075898 882 ntBASIC24.56■■□□□ 1.52
Cachd1Q6PDJ1 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Cachd1Q6PDJ1 Gm5067-201ENSMUST00000170449 1009 ntBASIC24.55■■□□□ 1.52
Cachd1Q6PDJ1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Cachd1Q6PDJ1 Gm5522-201ENSMUST00000189483 1242 ntBASIC24.54■■□□□ 1.52
Cachd1Q6PDJ1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Cachd1Q6PDJ1 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC24.52■■□□□ 1.52
Cachd1Q6PDJ1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC24.52■■□□□ 1.52
Cachd1Q6PDJ1 Gm27502-201ENSMUST00000183495 199 ntBASIC24.52■■□□□ 1.52
Cachd1Q6PDJ1 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Cachd1Q6PDJ1 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
Cachd1Q6PDJ1 AC093043.1-201ENSMUST00000226700 898 ntBASIC24.51■■□□□ 1.51
Cachd1Q6PDJ1 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cachd1Q6PDJ1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cachd1Q6PDJ1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cachd1Q6PDJ1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.5■■□□□ 1.51
Cachd1Q6PDJ1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cachd1Q6PDJ1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.49■■□□□ 1.51
Cachd1Q6PDJ1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cachd1Q6PDJ1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Cachd1Q6PDJ1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
Cachd1Q6PDJ1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC24.48■■□□□ 1.51
Cachd1Q6PDJ1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Cachd1Q6PDJ1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Cachd1Q6PDJ1 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Cachd1Q6PDJ1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Cachd1Q6PDJ1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.45■■□□□ 1.5
Cachd1Q6PDJ1 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.45■■□□□ 1.5
Cachd1Q6PDJ1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Cachd1Q6PDJ1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.44■■□□□ 1.5
Cachd1Q6PDJ1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Cachd1Q6PDJ1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cachd1Q6PDJ1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.43■■□□□ 1.5
Cachd1Q6PDJ1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cachd1Q6PDJ1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.43■■□□□ 1.5
Cachd1Q6PDJ1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cachd1Q6PDJ1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Cachd1Q6PDJ1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
Cachd1Q6PDJ1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cachd1Q6PDJ1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cachd1Q6PDJ1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC24.41■■□□□ 1.5
Cachd1Q6PDJ1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cachd1Q6PDJ1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.4■■□□□ 1.5
Cachd1Q6PDJ1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Cachd1Q6PDJ1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
Cachd1Q6PDJ1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.38■■□□□ 1.49
Cachd1Q6PDJ1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Cachd1Q6PDJ1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Cachd1Q6PDJ1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC24.38■■□□□ 1.49
Cachd1Q6PDJ1 Gm15820-201ENSMUST00000201566 728 ntBASIC24.38■■□□□ 1.49
Cachd1Q6PDJ1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cachd1Q6PDJ1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cachd1Q6PDJ1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
Cachd1Q6PDJ1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.37■■□□□ 1.49
Cachd1Q6PDJ1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Cachd1Q6PDJ1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24.36■■□□□ 1.49
Cachd1Q6PDJ1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Cachd1Q6PDJ1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC24.36■■□□□ 1.49
Cachd1Q6PDJ1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Cachd1Q6PDJ1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cachd1Q6PDJ1 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC24.35■■□□□ 1.49
Cachd1Q6PDJ1 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Cachd1Q6PDJ1 Gm14523-201ENSMUST00000117260 558 ntBASIC24.34■■□□□ 1.49
Cachd1Q6PDJ1 AC153911.1-201ENSMUST00000220378 758 ntBASIC24.34■■□□□ 1.49
Cachd1Q6PDJ1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cachd1Q6PDJ1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cachd1Q6PDJ1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Cachd1Q6PDJ1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC24.31■■□□□ 1.48
Cachd1Q6PDJ1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cachd1Q6PDJ1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cachd1Q6PDJ1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC24.31■■□□□ 1.48
Cachd1Q6PDJ1 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.29■■□□□ 1.48
Cachd1Q6PDJ1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cachd1Q6PDJ1 Gm45102-201ENSMUST00000207427 857 ntBASIC24.28■■□□□ 1.48
Cachd1Q6PDJ1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cachd1Q6PDJ1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Cachd1Q6PDJ1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Cachd1Q6PDJ1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cachd1Q6PDJ1 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cachd1Q6PDJ1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Cachd1Q6PDJ1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cachd1Q6PDJ1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cachd1Q6PDJ1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC24.25■■□□□ 1.47
Cachd1Q6PDJ1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cachd1Q6PDJ1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.25■■□□□ 1.47
Cachd1Q6PDJ1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Cachd1Q6PDJ1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Cachd1Q6PDJ1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cachd1Q6PDJ1 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.24■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms