Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC36.27■■■■□ 3.4
Ptch1Q61115 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC36.27■■■■□ 3.4
Ptch1Q61115 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.39
Ptch1Q61115 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC36.25■■■■□ 3.39
Ptch1Q61115 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC36.25■■■■□ 3.39
Ptch1Q61115 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC36.25■■■■□ 3.39
Ptch1Q61115 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC36.24■■■■□ 3.39
Ptch1Q61115 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC36.23■■■■□ 3.39
Ptch1Q61115 Particl-201ENSMUST00000205370 1560 ntBASIC36.23■■■■□ 3.39
Ptch1Q61115 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC36.23■■■■□ 3.39
Ptch1Q61115 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC36.23■■■■□ 3.39
Ptch1Q61115 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC36.23■■■■□ 3.39
Ptch1Q61115 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
Ptch1Q61115 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC36.2■■■■□ 3.39
Ptch1Q61115 Scarna2-201ENSMUST00000157560 414 ntBASIC36.19■■■■□ 3.38
Ptch1Q61115 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC36.19■■■■□ 3.38
Ptch1Q61115 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC36.19■■■■□ 3.38
Ptch1Q61115 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC36.18■■■■□ 3.38
Ptch1Q61115 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
Ptch1Q61115 Gm30023-201ENSMUST00000197970 889 ntBASIC36.17■■■■□ 3.38
Ptch1Q61115 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC36.17■■■■□ 3.38
Ptch1Q61115 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC36.17■■■■□ 3.38
Ptch1Q61115 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC36.17■■■■□ 3.38
Ptch1Q61115 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC36.15■■■■□ 3.38
Ptch1Q61115 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC36.15■■■■□ 3.38
Ptch1Q61115 Gm4799-201ENSMUST00000095396 657 ntBASIC36.15■■■■□ 3.38
Ptch1Q61115 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC36.14■■■■□ 3.38
Ptch1Q61115 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC36.13■■■■□ 3.37
Ptch1Q61115 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC36.12■■■■□ 3.37
Ptch1Q61115 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC36.12■■■■□ 3.37
Ptch1Q61115 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC36.12■■■■□ 3.37
Ptch1Q61115 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC36.12■■■■□ 3.37
Ptch1Q61115 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC36.11■■■■□ 3.37
Ptch1Q61115 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC36.09■■■■□ 3.37
Ptch1Q61115 Gm6658-202ENSMUST00000209493 1885 ntBASIC36.09■■■■□ 3.37
Ptch1Q61115 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC36.08■■■■□ 3.37
Ptch1Q61115 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC36.08■■■■□ 3.37
Ptch1Q61115 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
Ptch1Q61115 Gm9806-201ENSMUST00000051080 552 ntBASIC36.08■■■■□ 3.37
Ptch1Q61115 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
Ptch1Q61115 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC36.07■■■■□ 3.37
Ptch1Q61115 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC36.07■■■■□ 3.36
Ptch1Q61115 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC36.07■■■■□ 3.36
Ptch1Q61115 Gm11687-201ENSMUST00000118911 886 ntBASIC36.06■■■■□ 3.36
Ptch1Q61115 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
Ptch1Q61115 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC36.04■■■■□ 3.36
Ptch1Q61115 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC36.03■■■■□ 3.36
Ptch1Q61115 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC36.02■■■■□ 3.36
Ptch1Q61115 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC36.01■■■■□ 3.36
Ptch1Q61115 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
Ptch1Q61115 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC35.98■■■■□ 3.35
Ptch1Q61115 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC35.98■■■■□ 3.35
Ptch1Q61115 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC35.97■■■■□ 3.35
Ptch1Q61115 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC35.96■■■■□ 3.35
Ptch1Q61115 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
Ptch1Q61115 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
Ptch1Q61115 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC35.95■■■■□ 3.35
Ptch1Q61115 Gm27502-201ENSMUST00000183495 199 ntBASIC35.93■■■■□ 3.34
Ptch1Q61115 Gm16437-201ENSMUST00000025669 507 ntBASIC35.93■■■■□ 3.34
Ptch1Q61115 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC35.93■■■■□ 3.34
Ptch1Q61115 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC35.92■■■■□ 3.34
Ptch1Q61115 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC35.91■■■■□ 3.34
Ptch1Q61115 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC35.91■■■■□ 3.34
Ptch1Q61115 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC35.9■■■■□ 3.34
Ptch1Q61115 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
Ptch1Q61115 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC35.9■■■■□ 3.34
Ptch1Q61115 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
Ptch1Q61115 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC35.88■■■■□ 3.33
Ptch1Q61115 Pkd1-207ENSMUST00000228550 1050 ntBASIC35.86■■■■□ 3.33
Ptch1Q61115 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
Ptch1Q61115 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
Ptch1Q61115 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
Ptch1Q61115 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
Ptch1Q61115 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
Ptch1Q61115 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC35.81■■■■□ 3.32
Ptch1Q61115 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC35.81■■■■□ 3.32
Ptch1Q61115 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
Ptch1Q61115 Gm45364-201ENSMUST00000210883 159 ntBASIC35.79■■■■□ 3.32
Ptch1Q61115 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC35.78■■■■□ 3.32
Ptch1Q61115 Gm7332-201ENSMUST00000118351 454 ntBASIC35.78■■■■□ 3.32
Ptch1Q61115 Gm15039-201ENSMUST00000118914 875 ntBASIC35.78■■■■□ 3.32
Ptch1Q61115 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
Ptch1Q61115 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC35.78■■■■□ 3.32
Ptch1Q61115 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
Ptch1Q61115 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC35.77■■■■□ 3.32
Ptch1Q61115 AC154454.1-201ENSMUST00000225253 216 ntBASIC35.77■■■■□ 3.32
Ptch1Q61115 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC35.77■■■■□ 3.32
Ptch1Q61115 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC35.76■■■■□ 3.32
Ptch1Q61115 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.31
Ptch1Q61115 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
Ptch1Q61115 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
Ptch1Q61115 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
Ptch1Q61115 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
Ptch1Q61115 Pcf11-205ENSMUST00000208255 1720 ntBASIC35.71■■■■□ 3.31
Ptch1Q61115 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
Ptch1Q61115 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC35.7■■■■□ 3.31
Ptch1Q61115 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.3
Ptch1Q61115 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC35.69■■■■□ 3.3
Ptch1Q61115 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC35.67■■■■□ 3.3
Ptch1Q61115 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms