Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Herc2Q4U2R1 Gm15820-201ENSMUST00000201566 728 ntBASIC15.22■□□□□ 0.03
Herc2Q4U2R1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Herc2Q4U2R1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Herc2Q4U2R1 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Herc2Q4U2R1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC15.2■□□□□ 0.02
Herc2Q4U2R1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC15.2■□□□□ 0.02
Herc2Q4U2R1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Herc2Q4U2R1 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Herc2Q4U2R1 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC15.19■□□□□ 0.02
Herc2Q4U2R1 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Herc2Q4U2R1 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Herc2Q4U2R1 Gm5921-201ENSMUST00000075898 882 ntBASIC15.19■□□□□ 0.02
Herc2Q4U2R1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Herc2Q4U2R1 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Herc2Q4U2R1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Herc2Q4U2R1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Herc2Q4U2R1 Gm5067-201ENSMUST00000170449 1009 ntBASIC15.18■□□□□ 0.02
Herc2Q4U2R1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Herc2Q4U2R1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Herc2Q4U2R1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC15.17■□□□□ 0.02
Herc2Q4U2R1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC15.17■□□□□ 0.02
Herc2Q4U2R1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Herc2Q4U2R1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Herc2Q4U2R1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Herc2Q4U2R1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Herc2Q4U2R1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Herc2Q4U2R1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Herc2Q4U2R1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Herc2Q4U2R1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Herc2Q4U2R1 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Herc2Q4U2R1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC15.13■□□□□ 0.01
Herc2Q4U2R1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.11■□□□□ 0.01
Herc2Q4U2R1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Herc2Q4U2R1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Herc2Q4U2R1 AC153911.1-201ENSMUST00000220378 758 ntBASIC15.11■□□□□ 0.01
Herc2Q4U2R1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Herc2Q4U2R1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Herc2Q4U2R1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Herc2Q4U2R1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Herc2Q4U2R1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Herc2Q4U2R1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Herc2Q4U2R1 Gm5522-201ENSMUST00000189483 1242 ntBASIC15.09■□□□□ 0.01
Herc2Q4U2R1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Herc2Q4U2R1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Herc2Q4U2R1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Herc2Q4U2R1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Herc2Q4U2R1 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Herc2Q4U2R1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC15.08■□□□□ 0
Herc2Q4U2R1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Herc2Q4U2R1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC15.08■□□□□ 0
Herc2Q4U2R1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC15.07■□□□□ 0
Herc2Q4U2R1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Herc2Q4U2R1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Herc2Q4U2R1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Herc2Q4U2R1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC15.06■□□□□ 0
Herc2Q4U2R1 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC15.06■□□□□ 0
Herc2Q4U2R1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC15.06■□□□□ 0
Herc2Q4U2R1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC15.06■□□□□ 0
Herc2Q4U2R1 Gm30346-201ENSMUST00000218641 1699 ntBASIC15.06■□□□□ 0
Herc2Q4U2R1 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Herc2Q4U2R1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Herc2Q4U2R1 Rps24-207ENSMUST00000224568 714 ntBASIC15.05■□□□□ -0
Herc2Q4U2R1 Gm45102-201ENSMUST00000207427 857 ntBASIC15.04■□□□□ -0
Herc2Q4U2R1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Herc2Q4U2R1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Herc2Q4U2R1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC15.04■□□□□ -0
Herc2Q4U2R1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC15.04■□□□□ -0
Herc2Q4U2R1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Herc2Q4U2R1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Herc2Q4U2R1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Herc2Q4U2R1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC15.03■□□□□ -0
Herc2Q4U2R1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC15.03■□□□□ -0
Herc2Q4U2R1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Herc2Q4U2R1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Herc2Q4U2R1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Herc2Q4U2R1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Herc2Q4U2R1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Herc2Q4U2R1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Herc2Q4U2R1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Herc2Q4U2R1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15□□□□□ -0.01
Herc2Q4U2R1 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Herc2Q4U2R1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC15□□□□□ -0.01
Herc2Q4U2R1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Herc2Q4U2R1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Herc2Q4U2R1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Herc2Q4U2R1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC14.98□□□□□ -0.01
Herc2Q4U2R1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Herc2Q4U2R1 Gm14117-201ENSMUST00000122417 843 ntBASIC14.98□□□□□ -0.01
Herc2Q4U2R1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Herc2Q4U2R1 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC14.98□□□□□ -0.01
Herc2Q4U2R1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Herc2Q4U2R1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Herc2Q4U2R1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Herc2Q4U2R1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Herc2Q4U2R1 Particl-201ENSMUST00000205370 1560 ntBASIC14.97□□□□□ -0.01
Herc2Q4U2R1 Gm45364-201ENSMUST00000210883 159 ntBASIC14.97□□□□□ -0.01
Herc2Q4U2R1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC14.97□□□□□ -0.01
Herc2Q4U2R1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Herc2Q4U2R1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 141.1 ms