Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC31.2■■■□□ 2.58
Shank3Q4ACU6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Shank3Q4ACU6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Shank3Q4ACU6 Gm30023-201ENSMUST00000197970 889 ntBASIC31.19■■■□□ 2.58
Shank3Q4ACU6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Shank3Q4ACU6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Shank3Q4ACU6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Shank3Q4ACU6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Shank3Q4ACU6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Shank3Q4ACU6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC31.15■■■□□ 2.58
Shank3Q4ACU6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.58
Shank3Q4ACU6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC31.13■■■□□ 2.57
Shank3Q4ACU6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Shank3Q4ACU6 Particl-201ENSMUST00000205370 1560 ntBASIC31.13■■■□□ 2.57
Shank3Q4ACU6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Shank3Q4ACU6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Shank3Q4ACU6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Shank3Q4ACU6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Shank3Q4ACU6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Shank3Q4ACU6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Shank3Q4ACU6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Shank3Q4ACU6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Shank3Q4ACU6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Shank3Q4ACU6 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Shank3Q4ACU6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Shank3Q4ACU6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Shank3Q4ACU6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC31.04■■■□□ 2.56
Shank3Q4ACU6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Shank3Q4ACU6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
Shank3Q4ACU6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Shank3Q4ACU6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Shank3Q4ACU6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC31.03■■■□□ 2.56
Shank3Q4ACU6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Shank3Q4ACU6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Shank3Q4ACU6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Shank3Q4ACU6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
Shank3Q4ACU6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
Shank3Q4ACU6 Gm15039-201ENSMUST00000118914 875 ntBASIC30.97■■■□□ 2.55
Shank3Q4ACU6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Shank3Q4ACU6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Shank3Q4ACU6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Shank3Q4ACU6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC30.95■■■□□ 2.54
Shank3Q4ACU6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC30.94■■■□□ 2.54
Shank3Q4ACU6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC30.94■■■□□ 2.54
Shank3Q4ACU6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Shank3Q4ACU6 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Shank3Q4ACU6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Shank3Q4ACU6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
Shank3Q4ACU6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Shank3Q4ACU6 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Shank3Q4ACU6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Shank3Q4ACU6 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Shank3Q4ACU6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
Shank3Q4ACU6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Shank3Q4ACU6 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Shank3Q4ACU6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Shank3Q4ACU6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC30.91■■■□□ 2.54
Shank3Q4ACU6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC30.9■■■□□ 2.54
Shank3Q4ACU6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
Shank3Q4ACU6 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Shank3Q4ACU6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Shank3Q4ACU6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Shank3Q4ACU6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Shank3Q4ACU6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC30.86■■■□□ 2.53
Shank3Q4ACU6 Gm4799-201ENSMUST00000095396 657 ntBASIC30.85■■■□□ 2.53
Shank3Q4ACU6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC30.84■■■□□ 2.53
Shank3Q4ACU6 Gm12366-201ENSMUST00000121722 873 ntBASIC30.84■■■□□ 2.53
Shank3Q4ACU6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC30.84■■■□□ 2.53
Shank3Q4ACU6 Scarna2-201ENSMUST00000157560 414 ntBASIC30.84■■■□□ 2.53
Shank3Q4ACU6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC30.84■■■□□ 2.53
Shank3Q4ACU6 Gm5786-201ENSMUST00000085368 882 ntBASIC30.84■■■□□ 2.53
Shank3Q4ACU6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Shank3Q4ACU6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC30.83■■■□□ 2.53
Shank3Q4ACU6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Shank3Q4ACU6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC30.82■■■□□ 2.52
Shank3Q4ACU6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC30.82■■■□□ 2.52
Shank3Q4ACU6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Shank3Q4ACU6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Shank3Q4ACU6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC30.81■■■□□ 2.52
Shank3Q4ACU6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Shank3Q4ACU6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC30.8■■■□□ 2.52
Shank3Q4ACU6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Shank3Q4ACU6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
Shank3Q4ACU6 Gm45364-201ENSMUST00000210883 159 ntBASIC30.79■■■□□ 2.52
Shank3Q4ACU6 Pcf11-205ENSMUST00000208255 1720 ntBASIC30.79■■■□□ 2.52
Shank3Q4ACU6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Shank3Q4ACU6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC30.78■■■□□ 2.52
Shank3Q4ACU6 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Shank3Q4ACU6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Shank3Q4ACU6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Shank3Q4ACU6 Gm9806-201ENSMUST00000051080 552 ntBASIC30.77■■■□□ 2.52
Shank3Q4ACU6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Shank3Q4ACU6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Shank3Q4ACU6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC30.76■■■□□ 2.51
Shank3Q4ACU6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.51
Shank3Q4ACU6 Gm11687-201ENSMUST00000118911 886 ntBASIC30.76■■■□□ 2.51
Shank3Q4ACU6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC30.74■■■□□ 2.51
Shank3Q4ACU6 Pkd1-207ENSMUST00000228550 1050 ntBASIC30.73■■■□□ 2.51
Shank3Q4ACU6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC30.73■■■□□ 2.51
Shank3Q4ACU6 Gm27502-201ENSMUST00000183495 199 ntBASIC30.73■■■□□ 2.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms