Protein–RNA interactions for Protein: Q3UM89

Foxr2, Forkhead box protein R2, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxr2Q3UM89 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Foxr2Q3UM89 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Foxr2Q3UM89 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Foxr2Q3UM89 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Foxr2Q3UM89 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Foxr2Q3UM89 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Foxr2Q3UM89 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Foxr2Q3UM89 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Foxr2Q3UM89 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Foxr2Q3UM89 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Foxr2Q3UM89 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Foxr2Q3UM89 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Foxr2Q3UM89 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Foxr2Q3UM89 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Foxr2Q3UM89 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Foxr2Q3UM89 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Foxr2Q3UM89 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Foxr2Q3UM89 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Foxr2Q3UM89 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Foxr2Q3UM89 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.42■■□□□ 1.02
Foxr2Q3UM89 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Foxr2Q3UM89 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.41■■□□□ 1.02
Foxr2Q3UM89 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Foxr2Q3UM89 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Foxr2Q3UM89 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Foxr2Q3UM89 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Foxr2Q3UM89 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Foxr2Q3UM89 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Foxr2Q3UM89 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Foxr2Q3UM89 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Foxr2Q3UM89 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
Foxr2Q3UM89 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.39■■□□□ 1.01
Foxr2Q3UM89 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Foxr2Q3UM89 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Foxr2Q3UM89 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Foxr2Q3UM89 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Foxr2Q3UM89 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Foxr2Q3UM89 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Foxr2Q3UM89 Gm30023-201ENSMUST00000197970 889 ntBASIC21.36■■□□□ 1.01
Foxr2Q3UM89 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
Foxr2Q3UM89 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Foxr2Q3UM89 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Foxr2Q3UM89 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Foxr2Q3UM89 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Foxr2Q3UM89 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Foxr2Q3UM89 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Foxr2Q3UM89 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Foxr2Q3UM89 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.33■■□□□ 1
Foxr2Q3UM89 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.33■■□□□ 1
Foxr2Q3UM89 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.32■■□□□ 1
Foxr2Q3UM89 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Foxr2Q3UM89 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.32■■□□□ 1
Foxr2Q3UM89 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Foxr2Q3UM89 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Foxr2Q3UM89 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Foxr2Q3UM89 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Foxr2Q3UM89 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Foxr2Q3UM89 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Foxr2Q3UM89 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.29■■□□□ 1
Foxr2Q3UM89 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.28■■□□□ 1
Foxr2Q3UM89 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.28■■□□□ 1
Foxr2Q3UM89 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Foxr2Q3UM89 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
Foxr2Q3UM89 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.28■■□□□ 1
Foxr2Q3UM89 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Foxr2Q3UM89 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.28■■□□□ 1
Foxr2Q3UM89 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.28■■□□□ 1
Foxr2Q3UM89 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Foxr2Q3UM89 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Foxr2Q3UM89 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Foxr2Q3UM89 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.27■■□□□ 1
Foxr2Q3UM89 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Foxr2Q3UM89 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Foxr2Q3UM89 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Foxr2Q3UM89 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Foxr2Q3UM89 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Foxr2Q3UM89 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Foxr2Q3UM89 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Foxr2Q3UM89 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Foxr2Q3UM89 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Foxr2Q3UM89 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Foxr2Q3UM89 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Foxr2Q3UM89 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Foxr2Q3UM89 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Foxr2Q3UM89 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.23■□□□□ 0.99
Foxr2Q3UM89 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.22■□□□□ 0.99
Foxr2Q3UM89 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.22■□□□□ 0.99
Foxr2Q3UM89 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Foxr2Q3UM89 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Foxr2Q3UM89 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Foxr2Q3UM89 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
Foxr2Q3UM89 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Foxr2Q3UM89 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.18■□□□□ 0.98
Foxr2Q3UM89 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.18■□□□□ 0.98
Foxr2Q3UM89 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Foxr2Q3UM89 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Foxr2Q3UM89 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.17■□□□□ 0.98
Foxr2Q3UM89 Nkain2-201ENSMUST00000092602 558 ntBASIC21.17■□□□□ 0.98
Foxr2Q3UM89 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Foxr2Q3UM89 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms