Protein–RNA interactions for Protein: Q3U1Y4

Dennd4b, DENN domain-containing protein 4B, mousemouse

Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dennd4bQ3U1Y4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC36.28■■■■□ 3.4
Dennd4bQ3U1Y4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC36.27■■■■□ 3.4
Dennd4bQ3U1Y4 Gm6311-201ENSMUST00000073790 878 ntBASIC36.27■■■■□ 3.4
Dennd4bQ3U1Y4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC36.27■■■■□ 3.4
Dennd4bQ3U1Y4 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC36.27■■■■□ 3.4
Dennd4bQ3U1Y4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.4
Dennd4bQ3U1Y4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.4
Dennd4bQ3U1Y4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC36.24■■■■□ 3.39
Dennd4bQ3U1Y4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC36.23■■■■□ 3.39
Dennd4bQ3U1Y4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC36.23■■■■□ 3.39
Dennd4bQ3U1Y4 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC36.23■■■■□ 3.39
Dennd4bQ3U1Y4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC36.23■■■■□ 3.39
Dennd4bQ3U1Y4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC36.22■■■■□ 3.39
Dennd4bQ3U1Y4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC36.22■■■■□ 3.39
Dennd4bQ3U1Y4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC36.21■■■■□ 3.39
Dennd4bQ3U1Y4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC36.21■■■■□ 3.39
Dennd4bQ3U1Y4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
Dennd4bQ3U1Y4 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC36.2■■■■□ 3.38
Dennd4bQ3U1Y4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC36.19■■■■□ 3.38
Dennd4bQ3U1Y4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC36.17■■■■□ 3.38
Dennd4bQ3U1Y4 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC36.16■■■■□ 3.38
Dennd4bQ3U1Y4 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC36.15■■■■□ 3.38
Dennd4bQ3U1Y4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC36.15■■■■□ 3.38
Dennd4bQ3U1Y4 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC36.15■■■■□ 3.38
Dennd4bQ3U1Y4 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC36.14■■■■□ 3.38
Dennd4bQ3U1Y4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC36.14■■■■□ 3.38
Dennd4bQ3U1Y4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC36.13■■■■□ 3.37
Dennd4bQ3U1Y4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC36.13■■■■□ 3.37
Dennd4bQ3U1Y4 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC36.13■■■■□ 3.37
Dennd4bQ3U1Y4 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC36.12■■■■□ 3.37
Dennd4bQ3U1Y4 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC36.12■■■■□ 3.37
Dennd4bQ3U1Y4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC36.12■■■■□ 3.37
Dennd4bQ3U1Y4 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC36.11■■■■□ 3.37
Dennd4bQ3U1Y4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC36.11■■■■□ 3.37
Dennd4bQ3U1Y4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC36.11■■■■□ 3.37
Dennd4bQ3U1Y4 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC36.1■■■■□ 3.37
Dennd4bQ3U1Y4 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC36.1■■■■□ 3.37
Dennd4bQ3U1Y4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC36.09■■■■□ 3.37
Dennd4bQ3U1Y4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC36.08■■■■□ 3.37
Dennd4bQ3U1Y4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
Dennd4bQ3U1Y4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC36.08■■■■□ 3.37
Dennd4bQ3U1Y4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC36.08■■■■□ 3.37
Dennd4bQ3U1Y4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC36.06■■■■□ 3.36
Dennd4bQ3U1Y4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC36.06■■■■□ 3.36
Dennd4bQ3U1Y4 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC36.06■■■■□ 3.36
Dennd4bQ3U1Y4 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC36.06■■■■□ 3.36
Dennd4bQ3U1Y4 Zxda-201ENSMUST00000117281 2621 ntBASIC36.06■■■■□ 3.36
Dennd4bQ3U1Y4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
Dennd4bQ3U1Y4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC36.04■■■■□ 3.36
Dennd4bQ3U1Y4 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC36.04■■■■□ 3.36
Dennd4bQ3U1Y4 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC36.03■■■■□ 3.36
Dennd4bQ3U1Y4 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC36.03■■■■□ 3.36
Dennd4bQ3U1Y4 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC36.02■■■■□ 3.36
Dennd4bQ3U1Y4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC36.02■■■■□ 3.36
Dennd4bQ3U1Y4 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.36
Dennd4bQ3U1Y4 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC36.01■■■■□ 3.35
Dennd4bQ3U1Y4 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
Dennd4bQ3U1Y4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC36■■■■□ 3.35
Dennd4bQ3U1Y4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC35.99■■■■□ 3.35
Dennd4bQ3U1Y4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC35.99■■■■□ 3.35
Dennd4bQ3U1Y4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC35.99■■■■□ 3.35
Dennd4bQ3U1Y4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC35.97■■■■□ 3.35
Dennd4bQ3U1Y4 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC35.96■■■■□ 3.35
Dennd4bQ3U1Y4 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC35.96■■■■□ 3.35
Dennd4bQ3U1Y4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC35.96■■■■□ 3.35
Dennd4bQ3U1Y4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC35.94■■■■□ 3.34
Dennd4bQ3U1Y4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC35.93■■■■□ 3.34
Dennd4bQ3U1Y4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC35.92■■■■□ 3.34
Dennd4bQ3U1Y4 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
Dennd4bQ3U1Y4 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC35.91■■■■□ 3.34
Dennd4bQ3U1Y4 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC35.91■■■■□ 3.34
Dennd4bQ3U1Y4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC35.9■■■■□ 3.34
Dennd4bQ3U1Y4 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
Dennd4bQ3U1Y4 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC35.89■■■■□ 3.34
Dennd4bQ3U1Y4 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
Dennd4bQ3U1Y4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC35.88■■■■□ 3.33
Dennd4bQ3U1Y4 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC35.87■■■■□ 3.33
Dennd4bQ3U1Y4 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC35.87■■■■□ 3.33
Dennd4bQ3U1Y4 Pcf11-205ENSMUST00000208255 1720 ntBASIC35.86■■■■□ 3.33
Dennd4bQ3U1Y4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC35.86■■■■□ 3.33
Dennd4bQ3U1Y4 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
Dennd4bQ3U1Y4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC35.85■■■■□ 3.33
Dennd4bQ3U1Y4 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
Dennd4bQ3U1Y4 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC35.85■■■■□ 3.33
Dennd4bQ3U1Y4 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC35.85■■■■□ 3.33
Dennd4bQ3U1Y4 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
Dennd4bQ3U1Y4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
Dennd4bQ3U1Y4 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
Dennd4bQ3U1Y4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC35.84■■■■□ 3.33
Dennd4bQ3U1Y4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
Dennd4bQ3U1Y4 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC35.83■■■■□ 3.33
Dennd4bQ3U1Y4 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC35.83■■■■□ 3.33
Dennd4bQ3U1Y4 Gm43445-201ENSMUST00000198564 2091 ntBASIC35.83■■■■□ 3.33
Dennd4bQ3U1Y4 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
Dennd4bQ3U1Y4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
Dennd4bQ3U1Y4 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC35.82■■■■□ 3.33
Dennd4bQ3U1Y4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
Dennd4bQ3U1Y4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC35.8■■■■□ 3.32
Dennd4bQ3U1Y4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC35.8■■■■□ 3.32
Dennd4bQ3U1Y4 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC35.8■■■■□ 3.32
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms