Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
Xrn1P97789 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
Xrn1P97789 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC35.79■■■■□ 3.32
Xrn1P97789 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC35.78■■■■□ 3.32
Xrn1P97789 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.32
Xrn1P97789 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC35.76■■■■□ 3.31
Xrn1P97789 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.31
Xrn1P97789 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC35.74■■■■□ 3.31
Xrn1P97789 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
Xrn1P97789 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC35.74■■■■□ 3.31
Xrn1P97789 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
Xrn1P97789 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
Xrn1P97789 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
Xrn1P97789 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
Xrn1P97789 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
Xrn1P97789 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
Xrn1P97789 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
Xrn1P97789 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
Xrn1P97789 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC35.67■■■■□ 3.3
Xrn1P97789 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC35.67■■■■□ 3.3
Xrn1P97789 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
Xrn1P97789 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC35.66■■■■□ 3.3
Xrn1P97789 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
Xrn1P97789 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC35.66■■■■□ 3.3
Xrn1P97789 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC35.65■■■■□ 3.3
Xrn1P97789 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC35.64■■■■□ 3.3
Xrn1P97789 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
Xrn1P97789 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
Xrn1P97789 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
Xrn1P97789 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
Xrn1P97789 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC35.57■■■■□ 3.29
Xrn1P97789 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
Xrn1P97789 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
Xrn1P97789 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC35.55■■■■□ 3.28
Xrn1P97789 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC35.55■■■■□ 3.28
Xrn1P97789 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC35.54■■■■□ 3.28
Xrn1P97789 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
Xrn1P97789 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
Xrn1P97789 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC35.53■■■■□ 3.28
Xrn1P97789 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC35.53■■■■□ 3.28
Xrn1P97789 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
Xrn1P97789 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC35.51■■■■□ 3.28
Xrn1P97789 Pcf11-205ENSMUST00000208255 1720 ntBASIC35.51■■■■□ 3.28
Xrn1P97789 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC35.51■■■■□ 3.27
Xrn1P97789 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC35.5■■■■□ 3.27
Xrn1P97789 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
Xrn1P97789 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC35.49■■■■□ 3.27
Xrn1P97789 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC35.48■■■■□ 3.27
Xrn1P97789 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
Xrn1P97789 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC35.48■■■■□ 3.27
Xrn1P97789 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
Xrn1P97789 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
Xrn1P97789 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC35.46■■■■□ 3.27
Xrn1P97789 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC35.46■■■■□ 3.27
Xrn1P97789 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
Xrn1P97789 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC35.46■■■■□ 3.27
Xrn1P97789 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
Xrn1P97789 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
Xrn1P97789 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
Xrn1P97789 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
Xrn1P97789 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
Xrn1P97789 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC35.42■■■■□ 3.26
Xrn1P97789 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
Xrn1P97789 Gm45364-201ENSMUST00000210883 159 ntBASIC35.4■■■■□ 3.26
Xrn1P97789 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC35.38■■■■□ 3.25
Xrn1P97789 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC35.38■■■■□ 3.25
Xrn1P97789 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
Xrn1P97789 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
Xrn1P97789 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC35.35■■■■□ 3.25
Xrn1P97789 Scarna2-201ENSMUST00000157560 414 ntBASIC35.35■■■■□ 3.25
Xrn1P97789 Gm4799-201ENSMUST00000095396 657 ntBASIC35.35■■■■□ 3.25
Xrn1P97789 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC35.35■■■■□ 3.25
Xrn1P97789 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
Xrn1P97789 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
Xrn1P97789 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC35.34■■■■□ 3.25
Xrn1P97789 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC35.33■■■■□ 3.25
Xrn1P97789 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC35.33■■■■□ 3.25
Xrn1P97789 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC35.33■■■■□ 3.25
Xrn1P97789 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.25
Xrn1P97789 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC35.32■■■■□ 3.24
Xrn1P97789 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC35.31■■■■□ 3.24
Xrn1P97789 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
Xrn1P97789 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC35.3■■■■□ 3.24
Xrn1P97789 Pkd1-207ENSMUST00000228550 1050 ntBASIC35.3■■■■□ 3.24
Xrn1P97789 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC35.3■■■■□ 3.24
Xrn1P97789 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC35.29■■■■□ 3.24
Xrn1P97789 Gm12366-201ENSMUST00000121722 873 ntBASIC35.29■■■■□ 3.24
Xrn1P97789 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC35.29■■■■□ 3.24
Xrn1P97789 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC35.29■■■■□ 3.24
Xrn1P97789 Gm5786-201ENSMUST00000085368 882 ntBASIC35.29■■■■□ 3.24
Xrn1P97789 Gm9806-201ENSMUST00000051080 552 ntBASIC35.29■■■■□ 3.24
Xrn1P97789 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC35.28■■■■□ 3.24
Xrn1P97789 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC35.28■■■■□ 3.24
Xrn1P97789 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
Xrn1P97789 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
Xrn1P97789 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC35.27■■■■□ 3.24
Xrn1P97789 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC35.26■■■■□ 3.24
Xrn1P97789 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
Xrn1P97789 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC35.26■■■■□ 3.23
Xrn1P97789 Gm11687-201ENSMUST00000118911 886 ntBASIC35.26■■■■□ 3.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms