Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SgcaP82350 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SgcaP82350 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.79■□□□□ 0.76
SgcaP82350 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SgcaP82350 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SgcaP82350 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SgcaP82350 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.78■□□□□ 0.76
SgcaP82350 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SgcaP82350 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
SgcaP82350 Peli2-204ENSMUST00000226513 1320 ntBASIC19.76■□□□□ 0.75
SgcaP82350 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SgcaP82350 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.76■□□□□ 0.75
SgcaP82350 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SgcaP82350 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SgcaP82350 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SgcaP82350 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SgcaP82350 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SgcaP82350 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
SgcaP82350 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SgcaP82350 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SgcaP82350 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SgcaP82350 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SgcaP82350 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SgcaP82350 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SgcaP82350 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SgcaP82350 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SgcaP82350 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SgcaP82350 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.73■□□□□ 0.75
SgcaP82350 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SgcaP82350 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SgcaP82350 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SgcaP82350 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SgcaP82350 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SgcaP82350 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SgcaP82350 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SgcaP82350 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SgcaP82350 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SgcaP82350 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SgcaP82350 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SgcaP82350 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SgcaP82350 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SgcaP82350 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SgcaP82350 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SgcaP82350 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SgcaP82350 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SgcaP82350 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SgcaP82350 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SgcaP82350 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SgcaP82350 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SgcaP82350 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SgcaP82350 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SgcaP82350 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SgcaP82350 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SgcaP82350 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SgcaP82350 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SgcaP82350 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SgcaP82350 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.65■□□□□ 0.74
SgcaP82350 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SgcaP82350 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SgcaP82350 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SgcaP82350 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SgcaP82350 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.64■□□□□ 0.73
SgcaP82350 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.64■□□□□ 0.73
SgcaP82350 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SgcaP82350 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SgcaP82350 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
SgcaP82350 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SgcaP82350 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SgcaP82350 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SgcaP82350 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SgcaP82350 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SgcaP82350 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.61■□□□□ 0.73
SgcaP82350 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SgcaP82350 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SgcaP82350 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SgcaP82350 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SgcaP82350 Gm26115-201ENSMUST00000175605 87 ntBASIC19.59■□□□□ 0.73
SgcaP82350 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SgcaP82350 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SgcaP82350 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SgcaP82350 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SgcaP82350 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SgcaP82350 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
SgcaP82350 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SgcaP82350 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SgcaP82350 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SgcaP82350 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SgcaP82350 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SgcaP82350 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SgcaP82350 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SgcaP82350 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SgcaP82350 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SgcaP82350 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SgcaP82350 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SgcaP82350 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SgcaP82350 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SgcaP82350 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SgcaP82350 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SgcaP82350 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SgcaP82350 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms