Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Tpm1P58771 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Tpm1P58771 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Tpm1P58771 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Tpm1P58771 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Tpm1P58771 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Tpm1P58771 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Tpm1P58771 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Tpm1P58771 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
Tpm1P58771 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC26.39■■□□□ 1.82
Tpm1P58771 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Tpm1P58771 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Tpm1P58771 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Tpm1P58771 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Tpm1P58771 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Tpm1P58771 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC26.37■■□□□ 1.81
Tpm1P58771 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Tpm1P58771 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.37■■□□□ 1.81
Tpm1P58771 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Tpm1P58771 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Tpm1P58771 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC26.35■■□□□ 1.81
Tpm1P58771 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Tpm1P58771 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Tpm1P58771 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Tpm1P58771 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
Tpm1P58771 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Tpm1P58771 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Tpm1P58771 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
Tpm1P58771 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
Tpm1P58771 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Tpm1P58771 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Tpm1P58771 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.31■■□□□ 1.8
Tpm1P58771 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Tpm1P58771 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
Tpm1P58771 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Tpm1P58771 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
Tpm1P58771 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Tpm1P58771 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Tpm1P58771 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
Tpm1P58771 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Tpm1P58771 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Tpm1P58771 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Tpm1P58771 Gm16148-201ENSMUST00000119653 893 ntBASIC26.28■■□□□ 1.8
Tpm1P58771 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Tpm1P58771 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Tpm1P58771 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Tpm1P58771 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Tpm1P58771 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Tpm1P58771 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Tpm1P58771 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Tpm1P58771 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Tpm1P58771 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Tpm1P58771 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Tpm1P58771 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Tpm1P58771 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Tpm1P58771 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Tpm1P58771 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.25■■□□□ 1.79
Tpm1P58771 Gm24804-201ENSMUST00000174982 85 ntBASIC26.25■■□□□ 1.79
Tpm1P58771 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Tpm1P58771 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
Tpm1P58771 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Tpm1P58771 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Tpm1P58771 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.24■■□□□ 1.79
Tpm1P58771 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
Tpm1P58771 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Tpm1P58771 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Tpm1P58771 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Tpm1P58771 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Tpm1P58771 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Tpm1P58771 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Tpm1P58771 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Tpm1P58771 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Tpm1P58771 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
Tpm1P58771 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Tpm1P58771 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
Tpm1P58771 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.19■■□□□ 1.78
Tpm1P58771 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Tpm1P58771 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Tpm1P58771 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Tpm1P58771 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Tpm1P58771 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Tpm1P58771 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Tpm1P58771 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC26.16■■□□□ 1.78
Tpm1P58771 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Tpm1P58771 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Tpm1P58771 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Tpm1P58771 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Tpm1P58771 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Tpm1P58771 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Tpm1P58771 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
Tpm1P58771 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC26.13■■□□□ 1.77
Tpm1P58771 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Tpm1P58771 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Tpm1P58771 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Tpm1P58771 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Tpm1P58771 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Tpm1P58771 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Tpm1P58771 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Tpm1P58771 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Tpm1P58771 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms