Protein–RNA interactions for Protein: P56942

Pmch, Pro-MCH, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PmchP56942 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PmchP56942 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PmchP56942 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PmchP56942 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
PmchP56942 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PmchP56942 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PmchP56942 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PmchP56942 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PmchP56942 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PmchP56942 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PmchP56942 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PmchP56942 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PmchP56942 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PmchP56942 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PmchP56942 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PmchP56942 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
PmchP56942 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PmchP56942 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PmchP56942 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PmchP56942 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PmchP56942 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PmchP56942 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PmchP56942 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PmchP56942 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PmchP56942 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PmchP56942 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PmchP56942 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PmchP56942 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PmchP56942 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PmchP56942 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PmchP56942 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PmchP56942 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PmchP56942 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PmchP56942 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PmchP56942 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PmchP56942 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PmchP56942 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PmchP56942 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PmchP56942 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
PmchP56942 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PmchP56942 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PmchP56942 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PmchP56942 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PmchP56942 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PmchP56942 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PmchP56942 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PmchP56942 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PmchP56942 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PmchP56942 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PmchP56942 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PmchP56942 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PmchP56942 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PmchP56942 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PmchP56942 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PmchP56942 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.24■□□□□ 0.67
PmchP56942 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PmchP56942 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PmchP56942 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PmchP56942 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PmchP56942 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PmchP56942 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
PmchP56942 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PmchP56942 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.22■□□□□ 0.67
PmchP56942 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PmchP56942 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PmchP56942 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PmchP56942 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PmchP56942 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PmchP56942 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.21■□□□□ 0.67
PmchP56942 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PmchP56942 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PmchP56942 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.2■□□□□ 0.66
PmchP56942 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PmchP56942 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PmchP56942 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PmchP56942 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PmchP56942 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PmchP56942 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PmchP56942 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PmchP56942 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PmchP56942 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PmchP56942 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PmchP56942 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PmchP56942 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PmchP56942 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PmchP56942 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PmchP56942 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PmchP56942 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PmchP56942 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PmchP56942 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PmchP56942 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PmchP56942 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PmchP56942 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.15■□□□□ 0.66
PmchP56942 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PmchP56942 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PmchP56942 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PmchP56942 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PmchP56942 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.13■□□□□ 0.65
PmchP56942 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.13■□□□□ 0.65
PmchP56942 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms