Protein–RNA interactions for Protein: P21841

Sftpc, Pulmonary surfactant-associated protein C, mousemouse

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpcP21841 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SftpcP21841 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
SftpcP21841 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.31■■□□□ 1
SftpcP21841 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SftpcP21841 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.31■■□□□ 1
SftpcP21841 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SftpcP21841 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.29■■□□□ 1
SftpcP21841 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SftpcP21841 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.28■■□□□ 1
SftpcP21841 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.28■■□□□ 1
SftpcP21841 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SftpcP21841 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.28■■□□□ 1
SftpcP21841 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SftpcP21841 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SftpcP21841 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.26■□□□□ 0.99
SftpcP21841 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SftpcP21841 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SftpcP21841 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SftpcP21841 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SftpcP21841 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SftpcP21841 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SftpcP21841 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SftpcP21841 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
SftpcP21841 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SftpcP21841 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.23■□□□□ 0.99
SftpcP21841 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.23■□□□□ 0.99
SftpcP21841 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SftpcP21841 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SftpcP21841 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SftpcP21841 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SftpcP21841 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SftpcP21841 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SftpcP21841 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SftpcP21841 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SftpcP21841 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.21■□□□□ 0.99
SftpcP21841 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SftpcP21841 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SftpcP21841 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SftpcP21841 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
SftpcP21841 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SftpcP21841 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SftpcP21841 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SftpcP21841 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SftpcP21841 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SftpcP21841 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SftpcP21841 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SftpcP21841 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SftpcP21841 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SftpcP21841 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SftpcP21841 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SftpcP21841 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SftpcP21841 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SftpcP21841 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SftpcP21841 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SftpcP21841 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
SftpcP21841 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SftpcP21841 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SftpcP21841 Particl-201ENSMUST00000205370 1560 ntBASIC21.17■□□□□ 0.98
SftpcP21841 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SftpcP21841 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SftpcP21841 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SftpcP21841 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SftpcP21841 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SftpcP21841 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SftpcP21841 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.15■□□□□ 0.98
SftpcP21841 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SftpcP21841 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.98
SftpcP21841 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SftpcP21841 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SftpcP21841 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.14■□□□□ 0.97
SftpcP21841 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SftpcP21841 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SftpcP21841 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SftpcP21841 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SftpcP21841 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SftpcP21841 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SftpcP21841 Gm11687-201ENSMUST00000118911 886 ntBASIC21.12■□□□□ 0.97
SftpcP21841 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.12■□□□□ 0.97
SftpcP21841 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SftpcP21841 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SftpcP21841 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SftpcP21841 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.11■□□□□ 0.97
SftpcP21841 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SftpcP21841 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SftpcP21841 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SftpcP21841 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
SftpcP21841 Gm15039-201ENSMUST00000118914 875 ntBASIC21.08■□□□□ 0.97
SftpcP21841 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
SftpcP21841 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.07■□□□□ 0.96
SftpcP21841 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.06■□□□□ 0.96
SftpcP21841 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SftpcP21841 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SftpcP21841 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SftpcP21841 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SftpcP21841 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.04■□□□□ 0.96
SftpcP21841 Gm12366-201ENSMUST00000121722 873 ntBASIC21.04■□□□□ 0.96
SftpcP21841 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.04■□□□□ 0.96
SftpcP21841 Scarna2-201ENSMUST00000157560 414 ntBASIC21.04■□□□□ 0.96
SftpcP21841 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SftpcP21841 Gm9806-201ENSMUST00000051080 552 ntBASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms