Protein–RNA interactions for Protein: P13705

Msh3, DNA mismatch repair protein Msh3, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3P13705 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
Msh3P13705 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
Msh3P13705 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Msh3P13705 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
Msh3P13705 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Msh3P13705 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Msh3P13705 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Msh3P13705 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
Msh3P13705 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Msh3P13705 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
Msh3P13705 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Msh3P13705 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
Msh3P13705 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
Msh3P13705 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Msh3P13705 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Msh3P13705 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Msh3P13705 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC26.6■■□□□ 1.85
Msh3P13705 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Msh3P13705 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Msh3P13705 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC26.59■■□□□ 1.85
Msh3P13705 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
Msh3P13705 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
Msh3P13705 Gm30023-201ENSMUST00000197970 889 ntBASIC26.58■■□□□ 1.85
Msh3P13705 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Msh3P13705 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Msh3P13705 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Msh3P13705 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.57■■□□□ 1.84
Msh3P13705 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Msh3P13705 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
Msh3P13705 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC26.57■■□□□ 1.84
Msh3P13705 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Msh3P13705 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Msh3P13705 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Msh3P13705 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Msh3P13705 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC26.53■■□□□ 1.84
Msh3P13705 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC26.52■■□□□ 1.84
Msh3P13705 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
Msh3P13705 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Msh3P13705 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
Msh3P13705 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.52■■□□□ 1.84
Msh3P13705 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Msh3P13705 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC26.51■■□□□ 1.83
Msh3P13705 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Msh3P13705 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Msh3P13705 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Msh3P13705 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
Msh3P13705 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Msh3P13705 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC26.5■■□□□ 1.83
Msh3P13705 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Msh3P13705 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
Msh3P13705 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Msh3P13705 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.48■■□□□ 1.83
Msh3P13705 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Msh3P13705 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Msh3P13705 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Msh3P13705 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Msh3P13705 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
Msh3P13705 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.46■■□□□ 1.83
Msh3P13705 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Msh3P13705 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Msh3P13705 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Msh3P13705 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Msh3P13705 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Msh3P13705 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Msh3P13705 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Msh3P13705 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
Msh3P13705 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC26.42■■□□□ 1.82
Msh3P13705 Gm42809-201ENSMUST00000198429 1138 ntBASIC26.42■■□□□ 1.82
Msh3P13705 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Msh3P13705 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC26.41■■□□□ 1.82
Msh3P13705 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Msh3P13705 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Msh3P13705 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Msh3P13705 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Msh3P13705 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Msh3P13705 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC26.4■■□□□ 1.82
Msh3P13705 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Msh3P13705 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Msh3P13705 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC26.37■■□□□ 1.81
Msh3P13705 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Msh3P13705 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Msh3P13705 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Msh3P13705 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Msh3P13705 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Msh3P13705 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Msh3P13705 Nkain2-201ENSMUST00000092602 558 ntBASIC26.35■■□□□ 1.81
Msh3P13705 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.34■■□□□ 1.81
Msh3P13705 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC26.34■■□□□ 1.81
Msh3P13705 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Msh3P13705 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Msh3P13705 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Msh3P13705 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
Msh3P13705 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC26.33■■□□□ 1.8
Msh3P13705 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Msh3P13705 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Msh3P13705 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Msh3P13705 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Msh3P13705 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Msh3P13705 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Msh3P13705 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms