Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Gm16437-201ENSMUST00000025669 507 ntBASIC19.36■□□□□ 0.69
Fn1P11276 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Fn1P11276 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.35■□□□□ 0.69
Fn1P11276 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.35■□□□□ 0.69
Fn1P11276 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Fn1P11276 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Fn1P11276 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Fn1P11276 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Fn1P11276 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Fn1P11276 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.32■□□□□ 0.68
Fn1P11276 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.32■□□□□ 0.68
Fn1P11276 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.32■□□□□ 0.68
Fn1P11276 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Fn1P11276 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Fn1P11276 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Fn1P11276 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Fn1P11276 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Fn1P11276 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.31■□□□□ 0.68
Fn1P11276 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Fn1P11276 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Fn1P11276 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Fn1P11276 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Fn1P11276 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Fn1P11276 Gm27502-201ENSMUST00000183495 199 ntBASIC19.28■□□□□ 0.68
Fn1P11276 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Fn1P11276 Gm15546-201ENSMUST00000122095 826 ntBASIC19.27■□□□□ 0.68
Fn1P11276 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Fn1P11276 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fn1P11276 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fn1P11276 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.25■□□□□ 0.67
Fn1P11276 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.25■□□□□ 0.67
Fn1P11276 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fn1P11276 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fn1P11276 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fn1P11276 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Fn1P11276 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fn1P11276 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fn1P11276 Gm14523-201ENSMUST00000117260 558 ntBASIC19.24■□□□□ 0.67
Fn1P11276 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Fn1P11276 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Fn1P11276 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fn1P11276 Particl-201ENSMUST00000205370 1560 ntBASIC19.23■□□□□ 0.67
Fn1P11276 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.22■□□□□ 0.67
Fn1P11276 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.22■□□□□ 0.67
Fn1P11276 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.22■□□□□ 0.67
Fn1P11276 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.2■□□□□ 0.66
Fn1P11276 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fn1P11276 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.19■□□□□ 0.66
Fn1P11276 Gm5921-201ENSMUST00000075898 882 ntBASIC19.19■□□□□ 0.66
Fn1P11276 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fn1P11276 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Fn1P11276 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Fn1P11276 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.17■□□□□ 0.66
Fn1P11276 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Fn1P11276 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Fn1P11276 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fn1P11276 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Fn1P11276 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.15■□□□□ 0.66
Fn1P11276 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Fn1P11276 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Fn1P11276 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.14■□□□□ 0.66
Fn1P11276 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.14■□□□□ 0.65
Fn1P11276 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fn1P11276 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.13■□□□□ 0.65
Fn1P11276 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Fn1P11276 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.11■□□□□ 0.65
Fn1P11276 Gm45364-201ENSMUST00000210883 159 ntBASIC19.11■□□□□ 0.65
Fn1P11276 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.11■□□□□ 0.65
Fn1P11276 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Fn1P11276 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Fn1P11276 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Fn1P11276 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Fn1P11276 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Fn1P11276 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.09■□□□□ 0.65
Fn1P11276 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.09■□□□□ 0.65
Fn1P11276 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Fn1P11276 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Fn1P11276 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Fn1P11276 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Fn1P11276 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Fn1P11276 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Fn1P11276 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Fn1P11276 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Fn1P11276 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.07■□□□□ 0.64
Fn1P11276 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Fn1P11276 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Fn1P11276 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.06■□□□□ 0.64
Fn1P11276 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Fn1P11276 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Fn1P11276 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Fn1P11276 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Fn1P11276 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Fn1P11276 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
Fn1P11276 Gm10420-201ENSMUST00000121713 882 ntBASIC19.06■□□□□ 0.64
Fn1P11276 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Fn1P11276 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Fn1P11276 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Fn1P11276 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Fn1P11276 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.04■□□□□ 0.64
Fn1P11276 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms