Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ccl3P10855 Particl-201ENSMUST00000205370 1560 ntBASIC21.65■■□□□ 1.06
Ccl3P10855 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Ccl3P10855 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ccl3P10855 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Ccl3P10855 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Ccl3P10855 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccl3P10855 Cap2-205ENSMUST00000225824 1634 ntBASIC21.63■■□□□ 1.05
Ccl3P10855 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccl3P10855 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccl3P10855 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.62■■□□□ 1.05
Ccl3P10855 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ccl3P10855 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccl3P10855 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.61■■□□□ 1.05
Ccl3P10855 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Ccl3P10855 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccl3P10855 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccl3P10855 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccl3P10855 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccl3P10855 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.59■■□□□ 1.05
Ccl3P10855 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Ccl3P10855 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.58■■□□□ 1.05
Ccl3P10855 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ccl3P10855 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Ccl3P10855 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.57■■□□□ 1.04
Ccl3P10855 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.57■■□□□ 1.04
Ccl3P10855 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccl3P10855 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.56■■□□□ 1.04
Ccl3P10855 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.56■■□□□ 1.04
Ccl3P10855 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccl3P10855 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccl3P10855 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Ccl3P10855 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccl3P10855 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccl3P10855 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Ccl3P10855 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccl3P10855 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ccl3P10855 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.52■■□□□ 1.04
Ccl3P10855 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccl3P10855 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Ccl3P10855 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.49■■□□□ 1.03
Ccl3P10855 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Ccl3P10855 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccl3P10855 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ccl3P10855 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Ccl3P10855 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccl3P10855 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccl3P10855 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccl3P10855 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccl3P10855 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.47■■□□□ 1.03
Ccl3P10855 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccl3P10855 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Ccl3P10855 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccl3P10855 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccl3P10855 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccl3P10855 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.45■■□□□ 1.02
Ccl3P10855 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccl3P10855 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccl3P10855 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.44■■□□□ 1.02
Ccl3P10855 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccl3P10855 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccl3P10855 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Ccl3P10855 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ccl3P10855 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.42■■□□□ 1.02
Ccl3P10855 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccl3P10855 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccl3P10855 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccl3P10855 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccl3P10855 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccl3P10855 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccl3P10855 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.4■■□□□ 1.02
Ccl3P10855 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccl3P10855 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ccl3P10855 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccl3P10855 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ccl3P10855 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ccl3P10855 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Ccl3P10855 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ccl3P10855 Scarna2-201ENSMUST00000157560 414 ntBASIC21.38■■□□□ 1.01
Ccl3P10855 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccl3P10855 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Ccl3P10855 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.37■■□□□ 1.01
Ccl3P10855 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.37■■□□□ 1.01
Ccl3P10855 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccl3P10855 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccl3P10855 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ccl3P10855 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.36■■□□□ 1.01
Ccl3P10855 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ccl3P10855 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ccl3P10855 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ccl3P10855 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ccl3P10855 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccl3P10855 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.33■■□□□ 1.01
Ccl3P10855 Gm11687-201ENSMUST00000118911 886 ntBASIC21.33■■□□□ 1.01
Ccl3P10855 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccl3P10855 Gm9806-201ENSMUST00000051080 552 ntBASIC21.33■■□□□ 1.01
Ccl3P10855 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Ccl3P10855 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Ccl3P10855 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccl3P10855 Gm4799-201ENSMUST00000095396 657 ntBASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 133.7 ms