Protein–RNA interactions for Protein: P09079

Hoxb5, Homeobox protein Hox-B5, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb5P09079 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxb5P09079 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxb5P09079 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxb5P09079 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxb5P09079 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxb5P09079 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxb5P09079 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxb5P09079 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxb5P09079 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxb5P09079 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxb5P09079 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxb5P09079 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxb5P09079 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxb5P09079 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxb5P09079 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxb5P09079 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Hoxb5P09079 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxb5P09079 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxb5P09079 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxb5P09079 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxb5P09079 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.88■□□□□ 0.77
Hoxb5P09079 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxb5P09079 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxb5P09079 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxb5P09079 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxb5P09079 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxb5P09079 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxb5P09079 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Hoxb5P09079 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxb5P09079 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxb5P09079 Peli2-204ENSMUST00000226513 1320 ntBASIC19.86■□□□□ 0.77
Hoxb5P09079 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxb5P09079 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxb5P09079 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxb5P09079 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxb5P09079 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxb5P09079 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.85■□□□□ 0.77
Hoxb5P09079 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxb5P09079 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.85■□□□□ 0.77
Hoxb5P09079 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxb5P09079 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxb5P09079 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.85■□□□□ 0.77
Hoxb5P09079 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Hoxb5P09079 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.84■□□□□ 0.77
Hoxb5P09079 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxb5P09079 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hoxb5P09079 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Hoxb5P09079 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Hoxb5P09079 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxb5P09079 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Hoxb5P09079 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxb5P09079 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxb5P09079 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Hoxb5P09079 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxb5P09079 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxb5P09079 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxb5P09079 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxb5P09079 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxb5P09079 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxb5P09079 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxb5P09079 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxb5P09079 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Hoxb5P09079 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxb5P09079 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxb5P09079 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxb5P09079 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxb5P09079 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Hoxb5P09079 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.75■□□□□ 0.75
Hoxb5P09079 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.75■□□□□ 0.75
Hoxb5P09079 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxb5P09079 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxb5P09079 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
Hoxb5P09079 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxb5P09079 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxb5P09079 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxb5P09079 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Hoxb5P09079 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxb5P09079 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxb5P09079 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxb5P09079 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxb5P09079 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxb5P09079 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxb5P09079 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxb5P09079 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxb5P09079 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxb5P09079 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Hoxb5P09079 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.7■□□□□ 0.74
Hoxb5P09079 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxb5P09079 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxb5P09079 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxb5P09079 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxb5P09079 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Hoxb5P09079 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Hoxb5P09079 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxb5P09079 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxb5P09079 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxb5P09079 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxb5P09079 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxb5P09079 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxb5P09079 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms