Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
IghmP01872 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
IghmP01872 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
IghmP01872 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.57■■□□□ 1.2
IghmP01872 Gm9397-201ENSMUST00000200125 605 ntBASIC22.57■■□□□ 1.2
IghmP01872 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
IghmP01872 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
IghmP01872 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.57■■□□□ 1.2
IghmP01872 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
IghmP01872 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
IghmP01872 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
IghmP01872 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
IghmP01872 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.55■■□□□ 1.2
IghmP01872 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.55■■□□□ 1.2
IghmP01872 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.55■■□□□ 1.2
IghmP01872 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
IghmP01872 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
IghmP01872 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
IghmP01872 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
IghmP01872 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
IghmP01872 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.53■■□□□ 1.2
IghmP01872 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.53■■□□□ 1.2
IghmP01872 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
IghmP01872 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
IghmP01872 Gm24970-201ENSMUST00000175582 82 ntBASIC22.52■■□□□ 1.2
IghmP01872 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
IghmP01872 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
IghmP01872 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.51■■□□□ 1.19
IghmP01872 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.51■■□□□ 1.19
IghmP01872 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
IghmP01872 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
IghmP01872 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
IghmP01872 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
IghmP01872 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.48■■□□□ 1.19
IghmP01872 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
IghmP01872 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
IghmP01872 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
IghmP01872 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.46■■□□□ 1.19
IghmP01872 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
IghmP01872 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
IghmP01872 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
IghmP01872 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
IghmP01872 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.44■■□□□ 1.18
IghmP01872 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC22.44■■□□□ 1.18
IghmP01872 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
IghmP01872 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
IghmP01872 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.43■■□□□ 1.18
IghmP01872 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
IghmP01872 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.43■■□□□ 1.18
IghmP01872 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
IghmP01872 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
IghmP01872 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
IghmP01872 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.42■■□□□ 1.18
IghmP01872 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
IghmP01872 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
IghmP01872 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
IghmP01872 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
IghmP01872 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
IghmP01872 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
IghmP01872 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.38■■□□□ 1.17
IghmP01872 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.37■■□□□ 1.17
IghmP01872 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
IghmP01872 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
IghmP01872 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
IghmP01872 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
IghmP01872 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
IghmP01872 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
IghmP01872 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
IghmP01872 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
IghmP01872 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
IghmP01872 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
IghmP01872 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
IghmP01872 Gm45855-201ENSMUST00000212546 880 ntBASIC22.31■■□□□ 1.16
IghmP01872 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
IghmP01872 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.3■■□□□ 1.16
IghmP01872 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
IghmP01872 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
IghmP01872 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
IghmP01872 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
IghmP01872 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
IghmP01872 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.29■■□□□ 1.16
IghmP01872 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
IghmP01872 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.28■■□□□ 1.16
IghmP01872 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
IghmP01872 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
IghmP01872 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
IghmP01872 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
IghmP01872 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
IghmP01872 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
IghmP01872 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
IghmP01872 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
IghmP01872 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
IghmP01872 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
IghmP01872 Gm30023-201ENSMUST00000197970 889 ntBASIC22.25■■□□□ 1.15
IghmP01872 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
IghmP01872 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
IghmP01872 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
IghmP01872 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
IghmP01872 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.23■■□□□ 1.15
IghmP01872 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.22■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 3240.8 ms