Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cldn1O88551 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cldn1O88551 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Cldn1O88551 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.4■□□□□ 0.86
Cldn1O88551 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cldn1O88551 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cldn1O88551 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cldn1O88551 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn1O88551 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cldn1O88551 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldn1O88551 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cldn1O88551 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldn1O88551 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.37■□□□□ 0.85
Cldn1O88551 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cldn1O88551 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn1O88551 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn1O88551 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn1O88551 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cldn1O88551 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cldn1O88551 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cldn1O88551 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cldn1O88551 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cldn1O88551 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cldn1O88551 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cldn1O88551 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cldn1O88551 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cldn1O88551 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cldn1O88551 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Cldn1O88551 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cldn1O88551 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cldn1O88551 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cldn1O88551 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cldn1O88551 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cldn1O88551 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cldn1O88551 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cldn1O88551 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn1O88551 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn1O88551 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn1O88551 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn1O88551 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn1O88551 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn1O88551 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.29■□□□□ 0.84
Cldn1O88551 Gm12366-201ENSMUST00000121722 873 ntBASIC20.29■□□□□ 0.84
Cldn1O88551 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.29■□□□□ 0.84
Cldn1O88551 Scarna2-201ENSMUST00000157560 414 ntBASIC20.29■□□□□ 0.84
Cldn1O88551 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.29■□□□□ 0.84
Cldn1O88551 Gm5786-201ENSMUST00000085368 882 ntBASIC20.29■□□□□ 0.84
Cldn1O88551 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn1O88551 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Cldn1O88551 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn1O88551 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn1O88551 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Cldn1O88551 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.27■□□□□ 0.84
Cldn1O88551 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn1O88551 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Cldn1O88551 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn1O88551 Particl-201ENSMUST00000205370 1560 ntBASIC20.26■□□□□ 0.83
Cldn1O88551 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn1O88551 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn1O88551 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn1O88551 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn1O88551 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.26■□□□□ 0.83
Cldn1O88551 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn1O88551 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Cldn1O88551 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn1O88551 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Cldn1O88551 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn1O88551 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn1O88551 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn1O88551 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Cldn1O88551 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.24■□□□□ 0.83
Cldn1O88551 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.24■□□□□ 0.83
Cldn1O88551 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn1O88551 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn1O88551 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cldn1O88551 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.22■□□□□ 0.83
Cldn1O88551 Gm11687-201ENSMUST00000118911 886 ntBASIC20.22■□□□□ 0.83
Cldn1O88551 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cldn1O88551 Gm4799-201ENSMUST00000095396 657 ntBASIC20.22■□□□□ 0.83
Cldn1O88551 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn1O88551 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn1O88551 Gm9806-201ENSMUST00000051080 552 ntBASIC20.21■□□□□ 0.83
Cldn1O88551 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn1O88551 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.2■□□□□ 0.82
Cldn1O88551 Gm30023-201ENSMUST00000197970 889 ntBASIC20.2■□□□□ 0.82
Cldn1O88551 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cldn1O88551 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cldn1O88551 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cldn1O88551 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cldn1O88551 Gm16437-201ENSMUST00000025669 507 ntBASIC20.18■□□□□ 0.82
Cldn1O88551 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cldn1O88551 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cldn1O88551 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cldn1O88551 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cldn1O88551 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cldn1O88551 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cldn1O88551 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cldn1O88551 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cldn1O88551 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cldn1O88551 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms