Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cops4O88544 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Cops4O88544 Gm16148-201ENSMUST00000119653 893 ntBASIC21.86■■□□□ 1.09
Cops4O88544 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cops4O88544 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cops4O88544 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cops4O88544 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cops4O88544 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Cops4O88544 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cops4O88544 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cops4O88544 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cops4O88544 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cops4O88544 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cops4O88544 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cops4O88544 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.82■■□□□ 1.08
Cops4O88544 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cops4O88544 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cops4O88544 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Cops4O88544 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.81■■□□□ 1.08
Cops4O88544 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Cops4O88544 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.8■■□□□ 1.08
Cops4O88544 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cops4O88544 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.8■■□□□ 1.08
Cops4O88544 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cops4O88544 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cops4O88544 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cops4O88544 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Cops4O88544 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cops4O88544 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cops4O88544 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cops4O88544 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Cops4O88544 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.76■■□□□ 1.07
Cops4O88544 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cops4O88544 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cops4O88544 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cops4O88544 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cops4O88544 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cops4O88544 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Cops4O88544 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Cops4O88544 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cops4O88544 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cops4O88544 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Cops4O88544 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Cops4O88544 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cops4O88544 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cops4O88544 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cops4O88544 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cops4O88544 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cops4O88544 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Cops4O88544 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cops4O88544 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cops4O88544 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cops4O88544 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cops4O88544 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.69■■□□□ 1.06
Cops4O88544 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Cops4O88544 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cops4O88544 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cops4O88544 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Cops4O88544 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cops4O88544 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cops4O88544 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cops4O88544 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.66■■□□□ 1.06
Cops4O88544 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cops4O88544 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cops4O88544 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cops4O88544 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cops4O88544 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cops4O88544 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cops4O88544 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Cops4O88544 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Cops4O88544 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cops4O88544 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Cops4O88544 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
Cops4O88544 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cops4O88544 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cops4O88544 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cops4O88544 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.64■■□□□ 1.05
Cops4O88544 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cops4O88544 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cops4O88544 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Cops4O88544 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cops4O88544 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cops4O88544 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Cops4O88544 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cops4O88544 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cops4O88544 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cops4O88544 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cops4O88544 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cops4O88544 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cops4O88544 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cops4O88544 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Cops4O88544 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Cops4O88544 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cops4O88544 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cops4O88544 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cops4O88544 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cops4O88544 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.59■■□□□ 1.05
Cops4O88544 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cops4O88544 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.59■■□□□ 1.05
Cops4O88544 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms